DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5254 and ODC1

DIOPT Version :9

Sequence 1:NP_569856.2 Gene:CG5254 / 31020 FlyBaseID:FBgn0040383 Length:306 Species:Drosophila melanogaster
Sequence 2:NP_015191.1 Gene:ODC1 / 855969 SGDID:S000006055 Length:310 Species:Saccharomyces cerevisiae


Alignment Length:296 Identity:124/296 - (41%)
Similarity:169/296 - (57%) Gaps:19/296 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 FQVLAGGSAGFLEVCIMQPLDVVKTRIQIQAT----PAPNAAALGEVHYNGVFDCFAKMYRHEGI 76
            :|..||..||..|:.:|.||||||||:|:|.|    ||..||.....||.||.||..|:.:.||.
Yeast    13 YQFTAGAIAGVSELLVMYPLDVVKTRMQLQVTTKGHPAVVAAKAAVDHYTGVMDCLTKIVKKEGF 77

  Fly    77 SSYWKGIMPPILAETPKRAIKFLVFEQTKPLFQFGSPTPT-PLTFSLA---GLTAGTLEAIAVNP 137
            |..:|||..|||.|.|||||||...:..:..::...|||. .:|..:|   |.:||.:||..|.|
Yeast    78 SHLYKGITSPILMEAPKRAIKFSGNDTFQTFYKKIFPTPNGEMTQKIAIYSGASAGAVEAFVVAP 142

  Fly   138 FEVVKVAQQADRQKKMLSTFAVAKGIIQQDGLGFSGLNKGITATMGRNGVFNMVYFGFYHSVKNV 202
            ||:||:..| |...:..:...|.|..:.:.|:  ..|..|:.||:.|:.::|..|||....::.:
Yeast   143 FELVKIRLQ-DVNSQFKTPIEVVKNSVVKGGV--LSLFNGLEATIWRHVLWNAGYFGIIFQIRKL 204

  Fly   203 VPEYKESHLEFLRKVTIGFLAGTLACFVNIPFDVAKSRIQ---GPQPVPGQIKYRGTLSSMGIVY 264
            :|..|.|..:....:..|.:.||:.|.:|.||||.|||||   ||..     ||..:|.|:.:||
Yeast   205 LPAAKTSTEKTRNDLIAGAIGGTVGCLLNTPFDVVKSRIQRSSGPLR-----KYNWSLPSVLLVY 264

  Fly   265 REEGFRALYKGLVPKIMRLGPGGAILLLVFEYSYDY 300
            |||||:|||||..||:|||.|||.:||:||....|:
Yeast   265 REEGFKALYKGFAPKVMRLAPGGGLLLVVFTNVMDF 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5254NP_569856.2 Mito_carr 18..112 CDD:278578 45/97 (46%)
PTZ00169 19..301 CDD:240302 123/293 (42%)
Mito_carr 122..207 CDD:278578 27/87 (31%)
Mito_carr 209..305 CDD:278578 46/95 (48%)
ODC1NP_015191.1 Mito_carr 8..113 CDD:395101 46/99 (46%)
PTZ00169 11..302 CDD:240302 124/296 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157346473
Domainoid 1 1.000 87 1.000 Domainoid score I1835
eggNOG 1 0.900 - - E1_KOG0754
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 210 1.000 Inparanoid score I810
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53612
OrthoFinder 1 1.000 - - FOG0004440
OrthoInspector 1 1.000 - - mtm9243
orthoMCL 1 0.900 - - OOG6_101369
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R860
SonicParanoid 1 1.000 - - X2643
TreeFam 1 0.960 - -
1312.690

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