DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5254 and AT1G74240

DIOPT Version :9

Sequence 1:NP_569856.2 Gene:CG5254 / 31020 FlyBaseID:FBgn0040383 Length:306 Species:Drosophila melanogaster
Sequence 2:NP_177564.2 Gene:AT1G74240 / 843764 AraportID:AT1G74240 Length:364 Species:Arabidopsis thaliana


Alignment Length:344 Identity:84/344 - (24%)
Similarity:144/344 - (41%) Gaps:55/344 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAGQQHDISHAK-----RAAFQVLA-------------GGSAGFLEVCIMQPLDVVKTRIQIQAT 47
            ||.:..|.||.:     |.:.::.|             ||.||.....:|.|:|.:|||:|.|. 
plant     1 MATKSSDSSHKQSPPSFRKSVEIKATHDQFFVWREFLWGGIAGAFGEGMMHPVDTLKTRLQSQI- 64

  Fly    48 PAPNAAALGEVHYNGVFDCFAKMYRHEGISSYWKGIMPPILAETPKRAIKFLVFEQTKPLFQFGS 112
             ..||..    ....:......::..:|:..:::||.|.:.......|..|...|.||...:...
plant    65 -IMNATQ----RQKSILQMLRTVWVGDGLKGFYRGIAPGVTGSLATGATYFGFIESTKKWIEESH 124

  Fly   113 PT-PTPLTFSLAGLTAGTLEAIAVNPFEVVKVAQQADRQKKMLSTFAVAKGI-IQQDG------- 168
            |: .......:||....||.:....|.||:|...|........|::.....: :|..|       
plant   125 PSLAGHWAHFIAGAVGDTLGSFIYVPCEVIKQRMQIQGTSSSWSSYISRNSVPVQPRGDMYGYYT 189

  Fly   169 ------------LGFSGLNKGITATMGRNGVFNMVYFGFYHSVKNVVPEYKESHLEF-----LRK 216
                        .|..||..|..:|:.|:..|..:...||..:|::..:.|:...::     :..
plant   190 GMFQAGCSIWKEQGPKGLYAGYWSTLARDVPFAGLMVVFYEGLKDLTDQGKKKFPQYGVNSSIEG 254

  Fly   217 VTIGFLAGTLACFVNIPFDVAKSRIQGPQPVPGQ-IKYRGTLSSMGIVYREEGFRALYKGLVPKI 280
            :.:|.|||.|:.::..|.||.|:|:|    |.|. |||:|.|.::|.::|:||.:..::|.||::
plant   255 LVLGGLAGGLSAYLTTPLDVVKTRLQ----VQGSTIKYKGWLDAVGQIWRKEGPQGFFRGSVPRV 315

  Fly   281 MRLGPGGAILLLVFEYSYD 299
            |...|..|:..:..|:..|
plant   316 MWYLPASALTFMAVEFLRD 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5254NP_569856.2 Mito_carr 18..112 CDD:278578 24/106 (23%)
PTZ00169 19..301 CDD:240302 78/321 (24%)
Mito_carr 122..207 CDD:278578 22/104 (21%)
Mito_carr 209..305 CDD:278578 30/97 (31%)
AT1G74240NP_177564.2 Mito_carr 28..120 CDD:278578 23/97 (24%)
PTZ00168 34..332 CDD:185494 76/307 (25%)
Mito_carr 131..235 CDD:278578 22/103 (21%)
Mito_carr 265..339 CDD:278578 25/74 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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