DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5254 and CG5646

DIOPT Version :10

Sequence 1:NP_569856.2 Gene:CG5254 / 31020 FlyBaseID:FBgn0040383 Length:306 Species:Drosophila melanogaster
Sequence 2:NP_651568.1 Gene:CG5646 / 43311 FlyBaseID:FBgn0039525 Length:303 Species:Drosophila melanogaster


Alignment Length:320 Identity:73/320 - (22%)
Similarity:136/320 - (42%) Gaps:80/320 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 GGSAGFLEVCIMQPLDVVKTRIQIQATPAPNAAALGEVHYNGVFDCFAKMYRHEGISSYWKGIMP 85
            ||:.|   |.:..|||.:|  :..||:.:....|:.:::           .|:.|::.:::|:..
  Fly    15 GGACG---VLVAHPLDTIK--VWQQASNSSVVTAIQQIY-----------SRNNGVNGFYRGMFF 63

  Fly    86 PILAETPKRAIKFLVF-----------------EQTKPLFQFGSPTPTPLTFSLAGLTAGTLEAI 133
            |.::.....::.|.::                 ||.:....|           |||..||.:::.
  Fly    64 PFISTGAINSLLFGIY
GNHLRQLRKVCHSDYQREQLEYHNMF-----------LAGSVAGFVQSF 117

  Fly   134 AVNPFEVVKVAQQADR--------QKKMLSTFAVAKGIIQQDGLGFSGLNKGITATMGRNGVFNM 190
            ...|.|::||..|...        |::  :.|...|.|::.||:  |||.:|:...|.|    ::
  Fly   118 IACPMELIKVRLQTATYYSDYLYGQRR--TAFGTFKRILKTDGI--SGLYRGLLPMMCR----DV 174

  Fly   191 VYFGFYHSVKNVVPEYKESHLEFLRK-------------VT--IGFLAGTLACFVNIPFDVAKSR 240
            :.:|.|........:|.:.. :|:|:             ||  .|..||.::....|||||.|:.
  Fly   175 LPYGIYMLAYRQGVDYM
DRR-DFVRRRRSQSDGSSVNLLVTTLAGAWAGVISWVCVIPFDVVKTL 238

  Fly   241 IQGPQPVPGQIKYRGTLSSMGIVYREEGFRALYKGLVPKIMRLGPGGAILLLVFEYSYDY 300
            :|..:    ..||||....:.:.||..|:|::::|....:.|..|..|...|.:||:.::
  Fly   239 MQADE----NHKYRGIFHCVRVQYRAYGWRSIFRGSWMLVARAVPFNAATFLGYEYALEW 294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5254NP_569856.2 Mito_carr 18..112 CDD:395101 19/107 (18%)
Mito_carr 122..207 CDD:395101 24/92 (26%)
Mito_carr 209..305 CDD:395101 29/107 (27%)
CG5646NP_651568.1 Mito_carr 5..79 CDD:395101 16/79 (20%)
Mito_carr 97..191 CDD:395101 27/112 (24%)
Mito_carr 207..294 CDD:395101 27/90 (30%)

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