DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5254 and Tpc1

DIOPT Version :10

Sequence 1:NP_569856.2 Gene:CG5254 / 31020 FlyBaseID:FBgn0040383 Length:306 Species:Drosophila melanogaster
Sequence 2:NP_650034.1 Gene:Tpc1 / 41316 FlyBaseID:FBgn0037852 Length:332 Species:Drosophila melanogaster


Alignment Length:312 Identity:82/312 - (26%)
Similarity:129/312 - (41%) Gaps:35/312 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 HAKRAAF-QVLAGGSAGFLEVCIMQPLDVVKTRIQIQATP-APNAAALG----EVHYNGVFDCFA 68
            |:.|... |:||||.:..:.....|||||:|.|.|:|..| ..|||..|    ...|..:.....
  Fly    23 HSTREQLHQMLAGGLSAAITRSTCQPLDVLKIRFQLQVEPLGKNAAKEGPGALTSKYTSIGQAVK 87

  Fly    69 KMYRHEGISSYWKGIMPPILAETPKRAIKFLVFEQTKPLFQFGS--PTPTPLTFSLAGLTAGTLE 131
            .:||.||:.::|||..|..:........:|..:||...:.:..|  .....|:..|.|..||...
  Fly    88 TIYREEGMLAFWKGHNPAQVLSIMYGICQFWTYEQLSLMAKQTSYLADHQHLSNFLCGAAAGGAA 152

  Fly   132 AIAVNPFEVVK---VAQQADRQKKMLSTFAVAKGIIQQDG-----LGFSGLNKGITATMGRNGVF 188
            .|...|.:|::   :||  |..|...:.......|::|:|     .|.|.....||..||.|   
  Fly   153 VIISTPLDVIRTRLIAQ--DTSKGYRNATRAVSAIVRQEGPRGMYRGLSSALLQITPLMGTN--- 212

  Fly   189 NMVYFGFYHSVKNVVPEYKE----SHLEFLRKVTIGFLAGTLACFVNIPFDVAKSRIQ------G 243
                |..|....:....:.|    |.|.....:.:|..:|.|:..:..|||:.|.|:|      .
  Fly   213 ----FMAYRLFSDWACAFLEVSDRSQLPTWTLLGLGASSGMLSKTIVYPFDLIKKRLQIQGFESN 273

  Fly   244 PQPVPGQIKYRGTLSSMGIVYREEGFRALYKGLVPKIMRLGPGGAILLLVFE 295
            .|.....::..|....:.:..|:||.|.||||:.|.:::.....|:...:::
  Fly   274 RQTFGQTLQCHGVWDCLRLTVRQEGVRGLYKGVAPTLLKSSMTTALYFSIYD 325

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5254NP_569856.2 Mito_carr 18..112 CDD:395101 30/98 (31%)
Mito_carr 122..207 CDD:395101 23/92 (25%)
Mito_carr 209..305 CDD:395101 23/93 (25%)
Tpc1NP_650034.1 Mito_carr 29..123 CDD:395101 30/93 (32%)
Mito_carr 153..222 CDD:395101 19/77 (25%)
Mito_carr 233..328 CDD:395101 23/93 (25%)

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