DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5254 and CG2616

DIOPT Version :9

Sequence 1:NP_569856.2 Gene:CG5254 / 31020 FlyBaseID:FBgn0040383 Length:306 Species:Drosophila melanogaster
Sequence 2:NP_001287212.1 Gene:CG2616 / 40915 FlyBaseID:FBgn0037512 Length:449 Species:Drosophila melanogaster


Alignment Length:365 Identity:98/365 - (26%)
Similarity:163/365 - (44%) Gaps:87/365 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 SHAK---------RAAFQVLAGGSAGFLEVCIMQPLDVVKTRIQIQATPA--------------- 49
            ||.|         |...||::..:...:..|.|.||||:|||:|.|.:||               
  Fly    76 SHRKLLSDPRFQIRPLQQVISACTGAMITACFMTPLDVIKTRMQSQQSPAHKCFFYSNGLMDHLF 140

  Fly    50 ---PNAAALGEV----HYNGVFDCFAKMYRHEGISSYWKGIMPPILAETPKRAIKFLVFEQTKPL 107
               ||.:.|..:    .::..:|...|:.||||:::.|.|:.|.:::..|...|.|:.:||.|..
  Fly   141 ASGPNGSELASLRQRPQFSSSWDALMKISRHEGLAALWSGLGPTLVSALPSTIIYFVAYEQFKAR 205

  Fly   108 F----------------------QFGSPTPTPLTFSLAGLTAGTLEAIAVNPFEVVKVAQQADRQ 150
            :                      :...|:..|:   ::|:||.......|:|.|:|:...||.||
  Fly   206 YLQIYESHYNKSQEPRHLEIRDTKKSLPSVVPM---MSGVTARICAVTVVSPIELVRTKMQAQRQ 267

  Fly   151 KKMLSTFA----VAKGIIQQDGLGFSGLNKGITATMGRNGVFNMVYFGFYHSVKNVV-----PEY 206
                 |:|    ..:.::...|:.  ||.:|:..|:.|:..|:.:|:..|.|:|..:     |.:
  Fly   268 -----TYAQMLQFVRSVVALQGVW--GLWRGLRPTILRDVPFSGIYWPIYESLKQNLGHGSQPSF 325

  Fly   207 KESHLEFLRKVTIGFLAGTLACFVNIPFDVAKSRIQ---GPQPV----PGQ-IKYRGTLSSMGIV 263
            .   |.||    .|.:|||:|..|..||||.|:..|   |.:.:    |.: ...:.|.|.:..:
  Fly   326 S---LSFL----AGVMAGTVAAIVTTPFDVVKTHEQIEFGERVIFTDSPARDFGKKSTFSRLTGI 383

  Fly   264 YREEGFRALYKGLVPKIMRLGPGGAILLLVFEYSYDYLLH 303
            ||..|.|.|:.|..|:::::.|..||::..||||..:..|
  Fly   384 YRTHGVRGLFAGCGPRLLKVAPACAIMISTFEYSKSFFFH 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5254NP_569856.2 Mito_carr 18..112 CDD:278578 32/137 (23%)
PTZ00169 19..301 CDD:240302 91/342 (27%)
Mito_carr 122..207 CDD:278578 25/93 (27%)
Mito_carr 209..305 CDD:278578 34/103 (33%)
CG2616NP_001287212.1 Mito_carr 86..207 CDD:278578 34/120 (28%)
Mito_carr 230..321 CDD:278578 26/100 (26%)
Mito_carr 321..425 CDD:278578 35/110 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45441508
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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