DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5254 and CG18418

DIOPT Version :10

Sequence 1:NP_569856.2 Gene:CG5254 / 31020 FlyBaseID:FBgn0040383 Length:306 Species:Drosophila melanogaster
Sequence 2:NP_647924.2 Gene:CG18418 / 38572 FlyBaseID:FBgn0035568 Length:311 Species:Drosophila melanogaster


Alignment Length:276 Identity:83/276 - (30%)
Similarity:139/276 - (50%) Gaps:26/276 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 GGSAGFLEVCIMQPLDVVKTRIQIQATPAPNAAALGEVHYNGVFDCFAKMYRHEGISSYWKGIMP 85
            ||::|.|..||:||||::|||:||..|       ||...|...|:..:|:.::|||.|.:.|:..
  Fly    21 GGTSGMLATCIVQPLDLLKTRMQISGT-------LGTREYKNSFEVLSKVLKNEGILSLYNGLSA 78

  Fly    86 PILAETPKRAIKFLVFEQTKPLFQ--FGSPTPTPLTFSLAGLTAGTLEAIAVNPFEVVKVAQQAD 148
            .:|.:....:.|..|::.....::  ||: .|:.:.....|:.||...|:..||.||..:...:|
  Fly    79 GLLRQATYTSAKMGVYQMELDWYRKNFGN-Y
PSMVASMTMGIVAGAFGAMCGNPAEVALIRMMSD 142

  Fly   149 RQ---------KKMLSTFAVAKGIIQQDGLGFSGLNKGITATMGRNGVFNMVYFGFYHSVKNVVP 204
            .:         |.:...|.   .|::.:|:  ..|.:|...|:||..|.|||....|..:||.:.
  Fly   143 NRLMPEDRRNYKNVGDAFV---RIVKDEGV--VALWRGCLPTVGRAMVVNMVQLASYSLMKNQLH 202

  Fly   205 EYKESHLEFLRKVTIGFLAGTLACFVNIPFDVAKSRIQGPQPVPGQIKYRGTLSSMGIVYREEGF 269
            .|....:..  .:|...::|.|....::|.|:||:|||..:.:.|:.:|.||:..:..|.:.||.
  Fly   203 GYL
SEGIPL--HLTAALVSGLLTSVTSMPLDMAKTRIQQMKVIDGKPEYSGTIDVLKKVLKNEGA 265

  Fly   270 RALYKGLVPKIMRLGP 285
            .|::||..|.:||:||
  Fly   266 FAVWKGFTPYLMRMGP 281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5254NP_569856.2 Mito_carr 18..112 CDD:395101 30/92 (33%)
Mito_carr 122..207 CDD:395101 25/93 (27%)
Mito_carr 209..305 CDD:395101 25/77 (32%)
CG18418NP_647924.2 Mito_carr 10..108 CDD:395101 31/94 (33%)
Mito_carr 109..205 CDD:395101 26/100 (26%)
Mito_carr 208..300 CDD:395101 25/76 (33%)

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