DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5254 and Tpc2

DIOPT Version :10

Sequence 1:NP_569856.2 Gene:CG5254 / 31020 FlyBaseID:FBgn0040383 Length:306 Species:Drosophila melanogaster
Sequence 2:NP_001246511.1 Gene:Tpc2 / 37983 FlyBaseID:FBgn0035078 Length:323 Species:Drosophila melanogaster


Alignment Length:318 Identity:92/318 - (28%)
Similarity:142/318 - (44%) Gaps:52/318 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 QVLAGGSAGFLEVCIMQPLDVVKTRIQIQATPAPNAAALGEVH----YNGVFDCFAKMYRHEGIS 77
            |.:.||.||.....|.|||||:|.|.|:|..|..|       |    |.||...|..:|..||:.
  Fly    12 QAVGGGIAGAATRTITQPLDVLKIRFQMQVEPVTN-------HKGSKYRGVIHAFKSVYAEEGMR 69

  Fly    78 SYWKGIMPPILAETPKRAIKFLVFEQTKPL---FQFGSPTPTPLTFSLAGLTAGTLEAIAVNPFE 139
            ..::|.....:.......::|..:||.:.:   |.:....|. |.|.:.|..||.|.|:|..||:
  Fly    70 GMFRGHNSGQVLSISYALVQFWSYEQLRSMAHQFDYWRERPF-LMFFICGGIAGCLGAVAAQPFD 133

  Fly   140 VVK---VAQQADRQKKMLSTFAVAKGIIQQDGLGFSGLNKGITATMGRNGVFNMV--YFGFYHSV 199
            ||:   ||.....::..::||...:.:.:.:  |:.||::|:..|:.:  ||.:|  .|.||..:
  Fly   134 VVRTQMVAADPSSRRSQMNTFTGLRKVYKME--GWMGLSRGLPFTLVQ--VFPLVGANFLFYKYL 194

  Fly   200 KNVV-----PEYK-ESHLEFLRKVTIGFLAGTLACFVNIPFDVAKSRIQ-----------GPQPV 247
            ...|     |:.: |.|..||  ...|.|:|.||..:..|.|:.|.|||           |..|.
  Fly   195 NAAVLMAKPPDQRQEIHGAFL--FLNGALSGVLAKMIVYPADLLKKRIQLMAFKQERKTFGRNPE 257

  Fly   248 PGQIKYRGTLSSMGIVYREEGFRALYKGLVPKIMRLGPGGAILLLVFEYSYDYLLHNY 305
            ...|     |..:...:||||....|||::|.:::.|    ::..|:...||....:|
  Fly   258 CPTI-----LGCITTTFREEGIGGFYKGMLPTLLKAG----LMSAVYFSIYDMFKRHY 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5254NP_569856.2 Mito_carr 18..112 CDD:395101 29/100 (29%)
Mito_carr 122..207 CDD:395101 27/94 (29%)
Mito_carr 209..305 CDD:395101 30/106 (28%)
Tpc2NP_001246511.1 Mito_carr 23..99 CDD:395101 24/82 (29%)
Mito_carr 108..194 CDD:395101 28/90 (31%)
Mito_carr 216..307 CDD:395101 28/100 (28%)

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