Protein Alignment CG5254 and sea

DIOPT Version :9

• Sequence 1: NP_569856.2
• Gene: CG5254 / 31020
• FlyBaseID: FBgn0040383
• Length: 306
• Species: Drosophila melanogaster
• Sequence 2: NP_001027175.1
• Gene: sea / 3772221
• FlyBaseID: FBgn0037912
• Length: 317
• Species: Drosophila melanogaster
• Alignment Length: 300
• Identity: 94/300 - (31%)
• Similarity: 142/300 - (47%)
• Gaps: 44/300 - (14%)

  Fly    18 VLAGGSAGFLEVCIMQPLDVVKTRIQIQATPAPNAAALGEVHYNGVFDCFAKMYRHEGISSYWKG 82
            ::|||..|.:|:||..|.:.|||::|:....|..       .|||:|||..|.....|....::|
  Fly    37 IVAGGITGGIEICITYPTEYVKTQLQLDEKGAAK-------KYNGIFDCVKKTVGERGFLGLYRG 94

  Fly    83 IMPPILAETPKRAIKFLVFEQTK--------PLFQFGSPTPTPLTFSLAGLTAGTLEAI-AVNPF 138
            :...:....||.|.:|..||..|        .|...|.        .|.||.||..||| ||.|.
  Fly    95 LSVLVYGSIPKSAARFGAFEFLKSNAVDSRGQLSNSGK--------LLCGLGAGVCEAIVAVTPM 151

  Fly   139 EVVKVA----QQADRQKKMLSTFAVAKG-IIQQDGLGFSGLNKGITATMGRNGVFNMVYFGFYHS 198
            |.:||.    |::...|  ...||...| ||:.:|:  ||:.||:|.|:.:.|....:.|....|
  Fly   152 ETIKVKFINDQRSGNPK--FRGFAHGVGQIIKSEGI--SGIYKGLTPTILKQGSNQAIRFFVLES 212

  Fly   199 VKNVVPEYK-ESHLEFLRKVTIGF---LAGTLACFVNIPFDVAKSRIQGPQPVPGQIKYRGTLSS 259
            :|::   || :.|.:.:.|:.:|.   :||..:.|.|.|.||.|:|:||.:    ..||:.|...
  Fly   213 LKDL---YKGDDHTKPVPKLVVGVFGAIAGAASVFGNTPLDVVKTRMQGLE----ASKYKNTAHC 270

  Fly   260 MGIVYREEGFRALYKGLVPKIMRLGPGGAILLLVFEYSYD 299
            ...:.:.||..|.|||.||::.|:....||..::::...|
  Fly   271 AVEILKNEGPAAFYKGTVPRLGRVCLDVAITFMIYDSFMD 310

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG5254	NP_569856.2	Mito_carr	18..112	CDD:278578	30/101 (30%)
		PTZ00169	19..301	CDD:240302	93/298 (31%)
		Mito_carr	122..207	CDD:278578	32/90 (36%)
		Mito_carr	209..305	CDD:278578	28/93 (30%)
sea	NP_001027175.1	PTZ00168	34..302	CDD:185494	93/290 (32%)
		Mito_carr	34..117	CDD:278578	28/86 (33%)
		Mito_carr	125..220	CDD:278578	36/109 (33%)
		Mito_carr	235..314	CDD:278578	25/79 (32%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45442077
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.840