DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5254 and CG4995

DIOPT Version :9

Sequence 1:NP_569856.2 Gene:CG5254 / 31020 FlyBaseID:FBgn0040383 Length:306 Species:Drosophila melanogaster
Sequence 2:NP_609380.1 Gene:CG4995 / 34390 FlyBaseID:FBgn0032219 Length:399 Species:Drosophila melanogaster


Alignment Length:192 Identity:66/192 - (34%)
Similarity:94/192 - (48%) Gaps:19/192 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 TPLTFS-------LAGLTAGTLEAIAVNPFEVVKVAQQAD--RQKKMLSTFAVAKGIIQQDGLGF 171
            |..|||       :|||..|....:..:||:.|||..|.|  |..|...||...:.|:|:|  .|
  Fly    32 TSETFSPKMVVDFVAGLLGGAAGVLVGHPFDTVKVHLQTDDPRNPKYKGTFHCFRTIVQRD--KF 94

  Fly   172 SGLNKGITATMGRNGVFNMVYFGFYHSVKNVV--PEYKESHLEFLRKVTIGFLAGTLACFVNIPF 234
            .||.:||::.||..|:.|.:.||.|.:|:.:.  |....||.      ..|.:||....||..|.
  Fly    95 IGLYRGISSPMGGIGLVNAIVFGVYGNVQRLSNDPNSLTSHF------FAGSIAGVAQGFVCAPM 153

  Fly   235 DVAKSRIQGPQPVPGQIKYRGTLSSMGIVYREEGFRALYKGLVPKIMRLGPGGAILLLVFEY 296
            ::||:|:|....|...||:.|.:..:..:.:.||.|..:|||...|:|..||.|...:.|||
  Fly   154 ELAKTRLQLSTQVDSGIKFTGPIHCLKYIVKTEGIRGAFKGLTATILRDIPGFASYFVSFEY 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5254NP_569856.2 Mito_carr 18..112 CDD:278578
PTZ00169 19..301 CDD:240302 66/192 (34%)
Mito_carr 122..207 CDD:278578 32/88 (36%)
Mito_carr 209..305 CDD:278578 30/88 (34%)
CG4995NP_609380.1 Mito_carr 36..125 CDD:278578 33/90 (37%)
PTZ00169 41..295 CDD:240302 62/183 (34%)
Mito_carr 128..218 CDD:278578 31/94 (33%)
Mito_carr 221..304 CDD:278578
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45441408
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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