DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5254 and MME1

DIOPT Version :9

Sequence 1:NP_569856.2 Gene:CG5254 / 31020 FlyBaseID:FBgn0040383 Length:306 Species:Drosophila melanogaster
Sequence 2:NP_609093.1 Gene:MME1 / 33987 FlyBaseID:FBgn0031881 Length:299 Species:Drosophila melanogaster


Alignment Length:317 Identity:94/317 - (29%)
Similarity:145/317 - (45%) Gaps:40/317 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 QQHDISHAKRA--AFQVLAGGSAGFLEVCIMQPLDVVKTRIQIQATPAPNAAALGEVHYNGVFDC 66
            ::.:||..|::  ....:|||..|...|.:..|||.:|.|:|...||.|....    .|.||.||
  Fly     2 EEVEISTEKKSNPVKSFIAGGVGGMCNVLVGHPLDTIKVRLQTMPTPPPGQPP----RYKGVIDC 62

  Fly    67 FAKMYRHEGISSYWKGIMPPILAETPKRAIKFLVFEQTKPLFQFGSPTPTPLTFS---LAGLTAG 128
            .|:.:|:||...:::||..|::..||..|:.|.|:...|.|||  :.....||:.   .||..||
  Fly    63 AARTFRYEGFRGFYRGISAPLVGVTPIYAVDFAVYAAGKRLFQ--TDDHIRLTYPQIFAAGALAG 125

  Fly   129 TLEAIAVNPFEVVKVAQQADRQKKMLSTFAVAKGIIQQDGL-----------GFSGLNKGITATM 182
            ...|:...|         .||.|.:|.|..|:.|.:..:|.           |...|.||..|.:
  Fly   126 VCSALVTVP---------TDRIKVLLQTQTVSNGPLLYNGTIDTAAKLYRQGGIRSLFKGTCACI 181

  Fly   183 GRNGVFNMVYFGFYHSVKNVVPEYKESHLEFLRKVTI--GFLAGTLACFVNIPFDVAKSRIQ-GP 244
            .|:..... ||..|..::.:..: |.::.:.....||  |..||.:...:.:||||.|||:| .|
  Fly   182 LRDSPTGF-YFVTYEFLQELARK-KSANGKISTTSTILSGGTAGIVFWTLAVPFDVLKSRLQSAP 244

  Fly   245 QPVPGQIKYRGTLSSMGIVYREEGFRALYKGLVPKIMRLGPGGAILLLVFEYSYDYL 301
            :   |..|: |..|....:...||.:||::|::|.::|..|..|.:....|.:.|.|
  Fly   245 E---GTYKH-GIRSVFRNLMATEGPKALFRGILPILLRAFPSTAAVFFGVELTNDLL 297

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5254NP_569856.2 Mito_carr 18..112 CDD:278578 35/93 (38%)
PTZ00169 19..301 CDD:240302 90/298 (30%)
Mito_carr 122..207 CDD:278578 23/95 (24%)
Mito_carr 209..305 CDD:278578 30/96 (31%)
MME1NP_609093.1 Mito_carr 10..107 CDD:278578 36/102 (35%)
Mito_carr 111..205 CDD:278578 25/104 (24%)
Mito_carr 208..297 CDD:278578 29/92 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45441760
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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