Protein Alignment CG5254 and Rim2

DIOPT Version :10

• Sequence 1: NP_569856.2
• Gene: CG5254 / 31020
• FlyBaseID: FBgn0040383
• Length: 306
• Species: Drosophila melanogaster
• Sequence 2: NP_608615.1
• Gene: Rim2 / 33350
• FlyBaseID: FBgn0031359
• Length: 365
• Species: Drosophila melanogaster
• Alignment Length: 342
• Identity: 89/342 - (26%)
• Similarity: 145/342 - (42%)
• Gaps: 72/342 - (21%)

  Fly    18 VLAGGSAGFLEVCIMQPLDVVKTRIQIQA---TPAPNAAALGEVHYNG----------------- 62
            ::||||||.:...:..||:|||||:|...   ||:..|...|....||
  Fly    12 LIAGGSAGTVGAVVTCPLEVVKTRLQSSTAFMTPSRLAENAGGGPANGGQSELLRPEQRRKLSTT 76

  Fly    63 ----------------------------------VFDCFAKMYRHEGISSYWKGIMPPILAETPK 93
                                              :..|...:.::||..:.:||:.|.::...|.
  Fly    77 ILRNRSQPQVIGGVRRIMAISHCGISSTTPKSMSIVQCLRHIVQNEGPRALFKGLGPNLVGVAPS 141

  Fly    94 RAIKFLVFEQTK-PLFQFG-SPTPTPLTFSLAGLTAGTLEAIAVNPFEVVKVAQQADRQKKMLST 156
            |||.|..:.||| .|...| ....:||...::..:||.:.:.|.||...||...|.|...|:..|
  Fly   142 RAIYFCTYSQTKNTLNSLGFVERDSPLVHIMSAASAGFVSSTATNPIWFVKTRMQLDYNSKVQMT 206

  Fly   157 FAVAKGIIQQDGLGFSGLNKGITATMGRNGVF-NMVYFGFYHSVKNVVPEYK-ESHL------EF 213
            .......:...| |.:...|||||:.  .|:. .||:|..|..:|:.:.|.: :.|.      :|
  Fly   207 VRQCIERVYAQG-GVAAFYKGITASY--FGICETMVHFVIYEFIKSKLLEQRNQRHTDTKGSRDF 268

  Fly   214 LRKVTIGFLAGTLACFVNIPFDVAKSRIQGPQPVPGQIKYRGTLSSMGIVYREEGFRALYKGLVP 278
            |..:..|.::.|:|..:..|.:||::|::    ..|. ||.....::..|::|||...||:||..
  Fly   269 LEFMMAGAVSKTIASCIAYPHEVARTRLR----EEGN-KYNSFWQTLHTVWKEEGRAGLYRGLAT 328

  Fly   279 KIMRLGPGGAILLLVFE 295
            :::|..|..||::..:|
  Fly   329 QLVRQIPNTAIMMATYE 345

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG5254	NP_569856.2	Mito_carr	18..112	CDD:395101	36/149 (24%)
		Mito_carr	122..207	CDD:395101	25/85 (29%)
		Mito_carr	209..305	CDD:395101	26/93 (28%)
Rim2	NP_608615.1	Mito_carr	8..156	CDD:395101	34/143 (24%)
		Mito_carr	163..253	CDD:395101	26/92 (28%)
		Mito_carr	268..355	CDD:395101	25/83 (30%)