DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5254 and CG1628

DIOPT Version :9

Sequence 1:NP_569856.2 Gene:CG5254 / 31020 FlyBaseID:FBgn0040383 Length:306 Species:Drosophila melanogaster
Sequence 2:NP_572639.2 Gene:CG1628 / 31990 FlyBaseID:FBgn0030218 Length:459 Species:Drosophila melanogaster


Alignment Length:299 Identity:81/299 - (27%)
Similarity:135/299 - (45%) Gaps:41/299 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 LAGGSAGFLEVCIMQPLDVVKTRIQIQATPAPNAAALGEVHYNGVFDCFAKMYRHEGI-SSYWKG 82
            |||...|..:|.:.||||.||.::|    ..|.|       |.|:.|||...||.:|: ...:.|
  Fly   174 LAGSLGGAAQVYVSQPLDTVKVKLQ----TFPEA-------YRGMLDCFLSTYRKDGVLRGLYAG 227

  Fly    83 IMPPILAETPKRAIKFLVFEQTKPLFQF--GSPTPTPLTF---SLAGLTAGTLEAIAVNPFEVVK 142
            .:|.:.|...:.::.|..:...:....|  |..|...||.   :.||..|.....:.:.|.|::|
  Fly   228 SVPAVFANVAENSVLFAAYGGCQKFVAFCVGKETAGDLTTVQNACAGSLAACFSTLTLCPTELIK 292

  Fly   143 VAQQADRQKK----------MLSTFAVAKGIIQQDGLGFSGLNKGITATMGRNGVFNMVYFGFYH 197
            ...||.|:.|          :.:.:.:.:.|.:.:|:  .|..:|:::|..|.......:||.|.
  Fly   293 CKLQALREMKNFVEPAHPQDIRTPWTLTRYIWRTEGI--RGFYRGLSSTFLREMPGYFFFFGSYE 355

  Fly   198 SVKNVVPEYKESHLEF--LRKVTIGFLAGTLACFVNIPFDVAKSRIQGPQPVPGQIK-YRGTLSS 259
            ..:.::....:|..:.  ||.:..|.:.|........|.||.||||        |:| ...::.:
  Fly   356 GTRELLRRDDQSKDDIGPLRTMIAGAIGGVCLWTSTFPADVIKSRI--------QVKNLNESMFA 412

  Fly   260 MGI-VYREEGFRALYKGLVPKIMRLGPGGAILLLVFEYS 297
            :|. :.|.||..|||:||:|.::|..|..|.|.:|:||:
  Fly   413 VGADIVRREGVLALYRGLLPSVLRTIPATATLFVVYEYT 451

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5254NP_569856.2 Mito_carr 18..112 CDD:278578 27/95 (28%)
PTZ00169 19..301 CDD:240302 81/299 (27%)
Mito_carr 122..207 CDD:278578 19/94 (20%)
Mito_carr 209..305 CDD:278578 31/93 (33%)
CG1628NP_572639.2 PTZ00169 162..455 CDD:240302 81/299 (27%)
Mito_carr 170..252 CDD:278578 26/88 (30%)
Mito_carr 263..364 CDD:278578 21/102 (21%)
Mito_carr 369..455 CDD:278578 30/91 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45441864
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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