DRSC/TRiP Functional Genomics Resources

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Protein Alignment sdk and Igdcc4

DIOPT Version :10

Sequence 1:NP_001284756.1 Gene:sdk / 31017 FlyBaseID:FBgn0021764 Length:2265 Species:Drosophila melanogaster
Sequence 2:XP_006511369.1 Gene:Igdcc4 / 56741 MGIID:1858497 Length:1312 Species:Mus musculus


Alignment Length:1675 Identity:364/1675 - (21%)
Similarity:571/1675 - (34%) Gaps:480/1675 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   148 FSEKSDVVVAYMGIFENTTEGRLTVI--SGHPAIFDMPPIE-----SIPVP---SVMWQSEDGPL 202
            ::..:..::|..|::.....|.::::  :.|.|   .||..     .:|:|   :|....::|||
Mouse    32 WASPAPAMLARRGLWGLAPRGCVSLLCTAWHRA---CPPARGPCAWELPLPQETTVKLSCDEGPL 93

  Fly   203 NYDIKYAFTHANQLIILSADENDRKGYRAKAINTQLGKEESSAFVHLNVSGDPYIEVAPEIIVRP 267
            .             :||..::       |..::..||...:.....:..|.|             
Mouse    94 Q-------------VILGPEQ-------AVVLDCTLGATAAGPPTRVTWSKD------------- 125

  Fly   268 QDVKVKVGTGVVELQCIANARPLHELE--TLWLKDGLAVETAGVRHTLNDPWNRTLALLQANSSH 330
                   |..|:|.:      .||.|.  :|||...|..|.:.....|. .|..|          
Mouse   126 -------GDTVLEHE------NLHLLPNGSLWLSSPLEQEDSDDEEALR-IWKVT---------- 166

  Fly   331 SGEYTCQVRLRSGGYPAVSASARLQILEPPLFFTPMRAETFGEFGGQVQLTCDVVGEPTPQVKWF 395
            .|.|:|......|...:..|..:|..||.   |:........|..|..:..|...|.|.|.:.|.
Mouse   167 EGSYSCLAHSPLGVVASQVAVVKLATLED---FSLHPESQIVEENGTARFECHTKGLPAPIITWE 228

  Fly   396 RNAESVDAHIESGRYTLNTDNTLVIKKLILDDAAMFQCLAINEAGENSASTWLRVKTKTAKNRVK 460
            ::..:|.   |..|.....:..|.|..:...||..::|:|.|.|.:                   
Mouse   229 KDQVTVP---EESRLITLPNGVLQILDVQDSDAGSYRCVATNSARQ------------------- 271

  Fly   461 RLAQPRILRVRASHAGLGSEKGSESGSSDRRKEFRFASAPIMELPPQNVTALDGKDATISCRAVG 525
            |.:|...|.| |....|.:.:|.:               .::...|:|.|.:.|:...:.|.|..
Mouse   272 RFSQEASLTV-ALRGSLEATRGQD---------------VVIVAAPENTTVVSGQSVVMECVASA 320

  Fly   526 SPNPNITWIYNETQLVDISSRVQILESGDLLISNIRSVDAGLYICVRANEAGS---VKGEAYLSV 587
            .|.|.::|:..:.:  .||:.|.:|...:|||::.:...:|:|:| |||:..:   ....|.|.|
Mouse   321 DPTPFVSWVRQDGK--PISTDVIVLGRTNLLIASAQPRHSGVYVC-RANKPRTRDFATAAAELRV 382

  Fly   588 LVRTQIIQPPVDTTVLLGLTATLQCKVSSDPSVPYNIDWYREGQSSTPISNSQRIGVQ-ADGQLE 651
            |....|.|.|...:.....||...|:.|.:|...  :.|..:|   .|:..:.|:.|| ..|.|.
Mouse   383 LAAPAISQAPEALSRTRASTARFVCRASGEPRPA--LHWLHDG---IPLRPNGRVKVQGGGGSLV 442

  Fly   652 IQAVRASDVGSYACVVTSPGGNETRAARLSVI---ELPFPPSNVKVERLPEPQQRSINVSWTPGF 713
            |..:...|.|.|.||..:..|....||.|:|:   .||..|:.|....|   ...|:.|:|....
Mouse   443 ITQIGLQDAGYYQCVAENSAGTACAAAPLAVVVREGLPSAPTRVTATPL---SSSSVLVAWERPE 504

  Fly   714 DGNSPISKFIIQRREVSELGPVPDPLLNWITELSNVSADQRWILLENLKAATVYQFRVSAVNRVG 778
            ..:..|..|.:..::...:..|.....        |:.|...:.:.:|:..|.|:|.|.|.:::|
Mouse   505 LHSEQIIGFSLHYQKARGVDNVEYQFA--------VNNDTTELQVRDLEPNTDYEFYVVAYSQLG 561

  Fly   779 EGSPSEPSNVVELPQEAPSGPPVGFVGSARSMSEIITQWQPPLEEHRNGQILGYILRYRLFGYNN 843
            ....|.|: :|....:.||..| ....|:.:.|:|...|.|......|||:|.|.:.|.|....:
Mouse   562 ASRTSSPA-LVHTLDDVPSAAP-QLTLSSPNPSDIRVAWLPLPSSLSNGQVLKYKIEYGLGKEED 624

  Fly   844 VPWSYQNITNEAQRNFLIQELITWKDYIVQIAAYNNMGVGVYTEGSKIKT-----KEGVPEAPPT 903
            ..:|.:...||.|  ..:..|...|.|.|:|:|....|.||.::..:.:|     :..||.| |.
Mouse   625 QVFSTEVPGNETQ--LTLNSLQPNKVYRVRISAGTGAGYGVPSQWMQHRTPGVHNQSHVPFA-PA 686

  Fly   904 NVKVEAINSTAARCRWTPPNPQQINGINQGYKIQAWQRRLIDGEWRDI---ERRMKTVPPS---- 961
            .:||.|...:.......||:|.||:    |||:.          ||::   |......||.    
Mouse   687 ELKVRAKMESLVVSWQPPPHPTQIS----GYKLY----------WREVGTEEEADGDRPPGGRGD 737

  Fly   962 ---LIDPLA--------EQTAILGGLEKFTEYNISVLCFTDPGDGVASSQVAVMTMDDVPD---- 1011
               .:.|:.        |.|.::.|    ..|.:.::.|....||.|:...........||    
Mouse   738 QAWDVGPVRLKKKVKQYELTQLVPG----RLYEVKLVAFNKHEDGYAAVWKGKTEKAPTPDLPIQ 798

  Fly  1012 -----EVTGLHFDDVSDRSVKVLWAPPRASNGILTGYTVRYQVKDRPDTLKSFNLTADDTELTVN 1071
                 ....:|.:..|..|:.:.|..|..:...:..||||:    .|..|::.:|          
Mouse   799 RGPPLPPAHVHAESNSSTSIWLRWKKPDFTTVKIVNYTVRF----GPWGLRNASL---------- 849

  Fly  1072 QLQATTHYWFEIVAWTRVGSGIPKTATIQSGVEPVLPHAPTALALSNIEAFSVVLQFTPGFDGNS 1136
                .|:|          .|.||                                  :||..|  
Mouse   850 ----VTYY----------TSPIP----------------------------------SPGSSG-- 864

  Fly  1137 SITKWKVEGQTARNMTWFTICEINDPDAETLTVTGLVPFTQYRLRLSASNVVGSSKPSEATKDFQ 1201
                                        |.:.:.||.|||:|...:. |:.|....|..:..:..
Mouse   865 ----------------------------EDILIGGLKPFTKYEFAVQ-SHGVDMDGPFGSVVERS 900

  Fly  1202 TIQARPKHPPFNVTVRAMSAQQLRVRWIPLQQTEWYGNPRGYNISYKQ----------LVKTPGT 1256
            |:..||..||.::.:..::...:|:.|.|  .||..|....|.|.|..          |:.|.|.
Mouse   901 TLPDRPSTPPSDLRLSPLTPSTVRLHWCP--PTEPNGEIVEYLILYSNNHTQPEHQWTLLTTEGN 963

  Fly  1257 IKYVPRSVVIEDHTANSHVLDSLEEWTLYEVKMNACNDVG---CSKESDT-AVERTREAVPSYGP 1317
            |           .:|..|   .||..|.|..||.|..:||   .|:..|. .:::|..     ..
Mouse   964 I-----------FSAEVH---GLESDTRYFFKMGARTEVGPGPFSRLQDVITLQKTFS-----DS 1009

  Fly  1318 LDVQANATSSTTVVVQWGEVPRQHRNGQIDGYKVFYAAADRG-QQVLHK----------TIPNNA 1371
            |||.|    .|.::|           |...|.....|....| ::..|:          |..|.|
Mouse  1010 LDVHA----VTGIIV-----------GVCLGLLCLLACMCAGLRRSSHREALPGLSSSGTPGNPA 1059

  Fly  1372 TFT-TTLTELKKYVVYHVQVLAYTRLGNGALSTPPIRVQTFEDTPGVPSNV--SFPDV-SLTMAR 1432
            .:| ..|........:.::.|.:.|..:  .|.||..|   ||...|.|.:  |..|. ..:..:
Mouse  1060 LYTRARLGPPSVPAAHELESLVHPRPQD--WSPPPSDV---EDKAEVHSLMGGSVSDCRGHSKRK 1119

  Fly  1433 IIWDVPVDPN--GKILAYQVTYTLNGSAMLNYSREFPPSDRTFRATELLPGKYYSFSCTAQTRLG 1495
            |.|.....||  |.....::.   .||.         |.....||  |||.     :.|.||.| 
Mouse  1120 ISWAQAGGPNWAGSWAGCELP---QGSG---------PRPALTRA--LLPP-----AGTGQTLL- 1164

  Fly  1496 WGKIATALVY---TTNNRERPQAPSVPQISRSQIQAHQITFSWTPGRDGFAPLRYYTVEMRENEG 1557
                ..||||   .:|.|::| :|:    .|:|::|..|..|......|...|....:|..|   
Mouse  1165 ----LQALVYDAIKSNGRKKP-SPA----CRNQVEAEVIVHSDFGASKGCPDLHLQDLEPEE--- 1217

  Fly  1558 RWQPLPERVDPSLSSFTAVGLRPYMTYQFRIQATNDLGPSAFSRESVIVRTLPAAPAVGVGGLKV 1622
               ||.....||.|.  ||.|.         |..:.||     ||              :||.: 
Mouse  1218 ---PLTAETLPSTSG--AVDLS---------QGADWLG-----RE--------------LGGCQ- 1248

  Fly  1623 VPITTTSVRVQWSALETALWNGDASTGGYRILYQQLSDFPTALQSTPKTDVHGINENSVVLSDLQ 1687
             |.|:..                          ::|:..|.|..:            |...||||
Mouse  1249 -PTTSGP--------------------------ERLTCLPEAASA------------SCSCSDLQ 1274

  Fly  1688 QDRNYEIVVLPFNSQGPGPATPPAAVYVGEAVPTGEPRAVDAAPISSTEV 1737
            .....|        :.||.:..|.|:     .|.....::..||:||.:|
Mouse  1275 PSTAIE--------EAPGKSCQPKAL-----CPLTVSPSLPRAPVSSAQV 1311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sdkNP_001284756.1 Ig_3 72..142 CDD:464046
Ig 280..344 CDD:409353 15/65 (23%)
Ig strand B 280..283 CDD:409353 1/2 (50%)
Ig strand C 292..298 CDD:409353 2/7 (29%)
Ig strand E 319..323 CDD:409353 1/3 (33%)
Ig strand F 333..338 CDD:409353 2/4 (50%)
Ig 360..451 CDD:472250 19/90 (21%)
Ig strand B 378..382 CDD:409353 0/3 (0%)
Ig strand C 391..395 CDD:409353 0/3 (0%)
Ig strand E 416..420 CDD:409353 1/3 (33%)
Ig strand F 430..435 CDD:409353 1/4 (25%)
Ig strand G 443..446 CDD:409353 0/2 (0%)
Ig 502..587 CDD:472250 24/87 (28%)
Ig strand B 517..521 CDD:409353 0/3 (0%)
Ig strand C 530..534 CDD:409353 0/3 (0%)
Ig strand E 554..557 CDD:409353 1/2 (50%)
Ig strand F 567..572 CDD:409353 2/4 (50%)
Ig strand G 580..583 CDD:409353 0/2 (0%)
Ig 592..682 CDD:472250 26/90 (29%)
Ig strand B 608..612 CDD:409353 1/3 (33%)
Ig strand C 623..627 CDD:409353 0/3 (0%)
Ig strand E 648..652 CDD:409353 2/3 (67%)
Ig strand F 662..667 CDD:409353 2/4 (50%)
Ig strand G 675..678 CDD:409353 0/2 (0%)
FN3 686..789 CDD:238020 21/102 (21%)
FN3 798..893 CDD:238020 26/94 (28%)
FN3 901..1005 CDD:238020 26/121 (21%)
FN3 <960..>1261 CDD:442628 60/334 (18%)
fn3 1317..1402 CDD:394996 18/96 (19%)
FN3 1415..1507 CDD:238020 25/99 (25%)
FN3 1513..1608 CDD:238020 24/94 (26%)
FN3 1583..>2011 CDD:442628 28/155 (18%)
Igdcc4XP_006511369.1 Ig 90..182 CDD:472250 28/148 (19%)
Ig strand B 103..107 CDD:409353 0/3 (0%)
Ig strand C 118..123 CDD:409353 0/4 (0%)
Ig strand E 141..145 CDD:409353 1/3 (33%)
Ig strand F 169..174 CDD:409353 2/4 (50%)
I-set 196..281 CDD:400151 22/106 (21%)
Ig strand B 211..215 CDD:409353 0/3 (0%)
Ig strand C 224..228 CDD:409353 0/3 (0%)
Ig strand E 246..250 CDD:409353 1/3 (33%)
Ig strand F 260..265 CDD:409353 1/4 (25%)
Ig strand G 278..281 CDD:409353 1/2 (50%)
IG_like 301..382 CDD:214653 24/83 (29%)
Ig strand B 312..316 CDD:409353 0/3 (0%)
Ig strand C 325..330 CDD:409353 1/4 (25%)
Ig strand E 346..350 CDD:409353 1/3 (33%)
Ig strand F 360..365 CDD:409353 2/5 (40%)
Ig strand G 375..378 CDD:409353 0/2 (0%)
Ig 401..473 CDD:472250 23/76 (30%)
Ig strand B 403..407 CDD:409353 1/3 (33%)
Ig strand C 416..420 CDD:409353 0/5 (0%)
Ig strand E 437..443 CDD:409353 2/5 (40%)
FN3 <453..>655 CDD:442628 55/216 (25%)
Ig strand F 453..458 CDD:409353 2/4 (50%)
Ig strand G 466..469 CDD:409353 0/2 (0%)
fn3 684..778 CDD:394996 24/112 (21%)
FN3 802..901 CDD:238020 30/191 (16%)
FN3 909..1001 CDD:238020 28/107 (26%)
Blue background indicates that the domain is not in the aligned region.

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