DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sdk and igsf9ba

DIOPT Version :10

Sequence 1:NP_001284756.1 Gene:sdk / 31017 FlyBaseID:FBgn0021764 Length:2265 Species:Drosophila melanogaster
Sequence 2:XP_021322057.2 Gene:igsf9ba / 567389 ZFINID:ZDB-GENE-060503-729 Length:1475 Species:Danio rerio


Alignment Length:1619 Identity:313/1619 - (19%)
Similarity:515/1619 - (31%) Gaps:544/1619 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   267 PQDVKVKVGTGVVELQCIANARPLHELET----LWLKDGLAV---------------ETAGVRHT 312
            ||.|..:.|..|| |.|.. :.||:..:|    .|.|.|:.:               |.|| |.:
Zfish    30 PQFVTARAGESVV-LGCDV-SHPLNGQQTPYVVEWFKFGVPIPFFINFRFYPPHVDPEYAG-RAS 91

  Fly   313 LNDPWNRTLALLQANSSHSGEYTCQVRLRSGGYPAV--SASARLQILEPPLFF-TPMRAETFGEF 374
            |:.  ..:|.:.|..|...|.|.|:|.:....|...  .:...|.:..||.|. ||.:.....| 
Zfish    92 LHG--KASLQIEQVRSEDQGWYECRVLMLEQQYDTFHNGSWVHLTVNAPPTFSDTPPQYVEARE- 153

  Fly   375 GGQVQLTCDVVGEPTPQVKWFRNAESVDAHIESGRYTLNTDNTLVIKKLILDDAAMFQCLAINEA 439
            ||.:.|||...|.|.|.|.|.|..:.:.:   :.:||: :|.:|.::.:..:|...:.|.|.::.
Zfish   154 GGSITLTCTAFGNPKPVVTWLREGDQLTS---TRKYTV-SDGSLTVQAITREDRGAYSCRAHSDQ 214

  Fly   440 GENSASTWLRVKTKTAKNRVKRLAQPRILRVRASHAGLGSEKGSESGSSDRRKEFRFASAPIMEL 504
            ||...:|.|.|:                                              ..|.:..
Zfish   215 GEALHTTRLLVQ----------------------------------------------GPPYIVT 233

  Fly   505 PPQNVTALDGKDATISCRAVGSP-NPNITWIYNETQLV---DISSRVQILESGDLLISNIRSVDA 565
            ||:|:|....::|..:|:|...| |...||.:.|..:.   |:..||:|...|.|:|..::..||
Zfish   234 PPENITVNISQNAQFTCQAEAYPGNLTYTWYWEEDNVYFKNDLKLRVRIFIDGTLIIYRVKPEDA 298

  Fly   566 GLYICVRANEAG-SVKGEAYLSVLVRTQIIQPPVDTTVLLGLTATLQCKVSSDP----------- 618
            |.|.|..:|..| |....|||:|....:::..|....|...|:..::|.|.::|           
Zfish   299 GKYTCSPSNSLGISPSASAYLTVQYPARVVNMPPVIYVPRKLSGIIRCPVDANPPVTSVRWEKDG 363

  Fly   619 ---------------------------------SVPYNI-------------------------D 625
                                             .||||:                         .
Zfish   364 YPLRIEKYPGWSQMTDGSIRVAEVTEDSLGTYTCVPYNVLGTMGQSPPATLVLKDPPYFNVRPGG 428

  Fly   626 WYRE-------------GQSSTPISNSQRIG--------VQADGQLEIQAVRASDVGSYACVVTS 669
            .||:             |....|....:::|        :...|.|:..::...|.|.:.||.|:
Zfish   429 EYRQEAGRELVIPCAASGDPEIPTIQWRKVGKPSRSKHNLLPSGSLQFVSLSKEDHGEWECVATN 493

  Fly   670 PGGNETRAARLSVI-ELPFPPSNVKVERLPEPQQRSINVSWTPGFDGN---------SPISKFII 724
            ...:.|.:.||.|| ..|..|:||.|    .....|.||||.||:||.         .|:     
Zfish   494 VVTSITASTRLFVIGTSPHAPTNVHV----SASTSSANVSWEPGYDGGFEQTFSVWYGPV----- 549

  Fly   725 QRREVSELG-------PVPDPLLNWITELSNVSADQRWILLENLKAATVYQFRVSAVNRVGEGSP 782
              :..:::|       |||              ..|.|::::.|:..|.|||.|.|.|::|.|..
Zfish   550 --KVKNDVGTHDWLSIPVP--------------GSQMWLVVQGLEPKTAYQFSVLAQNKLGTGPF 598

  Fly   783 SEPSNV------VELPQEAPSGPPVGFVGSARSMSEIITQWQPPLEEHRNGQILGYILRYRLFGY 841
            ||...|      :..|:......|...:.:.|:...::..|.||  .:....|..|::.:||   
Zfish   599 SEVVTVTTGGYPISTPEPLVLLTPPRCLTANRTQQGVLLTWLPP--ANHTSPIDRYVIEFRL--- 658

  Fly   842 NNVPWS-YQNITNEAQRNFLIQELI--TWKDYIVQIAAYNNMGVGVYTEGSKIKTKEGVPEAPPT 903
             ...|. ..::....:...:.::||  :|.::.. :|..:::    .:|.|.:.........|||
Zfish   659 -GEKWEVLDDLIPATETEIIARDLIQDSWYEFRA-LAIMDDL----VSESSNVVGVSSTDPFPPT 717

  Fly   904 NVKVEAIN--------------------STAARCRWTPPNPQQINGINQGYKIQAWQRRLIDGEW 948
            .:..|.:.                    ||.|.|           .:|:.::.:..::|  |...
Zfish   718 EISDEGLAKPVVAGIVATICFLAAAILFSTLAAC-----------FVNKQHRRKLKRKR--DPPL 769

  Fly   949 RDIERRMKTVPPSLIDPLAEQTAILGGLEKFTEYNISVLCFTDPG-------------------- 993
            .....|.....|..:.||.       |:|.:.|         :|.                    
Zfish   770 SITHTRKSIESPPPLTPLP-------GIEPYWE---------EPDRSSYRPPSTSPQLSSGKISP 818

  Fly   994 DGVASSQVAVMTMDDVPDEVT-----GLHFDDVSDRSVKVLWAPPRASNGILTGYTVRYQVKDRP 1053
            :.:|||:         |..:.     ||:        ||.|.:|.:.....|      |:...|.
Zfish   819 ESIASSR---------PPSLASVGGHGLY--------VKKLPSPRKEKELSL------YKKTKRA 860

  Fly  1054 DTLKSFNLTADDTELTVNQLQATTHYWFEIVAWTRVGSGIPKTATIQSGVEPVLPHAPTALALSN 1118
            .|.|.::::..:.|:|..         .|:::....|..:.....|.|.::|           ..
Zfish   861 ITSKKYSVSKHEAEVTTP---------IELISRGPDGRFVMDPNDIDSSLKP-----------RR 905

  Fly  1119 IEAFSVVLQ--FTPGFDGNSSITKWKVEGQTARNMTWFTICEINDPDAETLTVTGLVPFTQYRLR 1181
            ||.|..|.:  ..|.|..:..                    |.:||        |.:|.....||
Zfish   906 IEGFPFVEESDLYPEFRQSDE--------------------ENDDP--------GPLPPVMATLR 942

  Fly  1182 LSASNVVGSSKPSEATKDFQTIQARPKHPPFNVTVRAMSAQQLRVRWIPLQQTEWYGNPRGYNIS 1246
            ...|.|..|.:        ..:|.....|.|...:..||..:    ...||.|   |..|   :|
Zfish   943 PQISPVSSSQE--------SYMQPPAYSPRFQRPMEGMSISE----GSRLQAT---GQSR---VS 989

  Fly  1247 YKQLVKTPGTI-KYVPRSVVIEDH--------TANSHVLDSLEEWTLYEVKMNACNDVGCSKESD 1302
            :...|..||.. .|:.....:|.|        :..|..:.|...:.          ..|..:...
Zfish   990 HFHRVFPPGPFYGYIGSGAEVELHPPFYMPDVSPRSSAMSSSPSYP----------PEGPFRHPT 1044

  Fly  1303 TAVERTREAVPSYG------PLDVQANATSSTTVVVQWGEVPRQHRNGQIDGYKVFYAAADRGQQ 1361
            ...||....:..||      || |.:..:|.:|.:.|..:.|...:.|.      ..|...|...
Zfish  1045 IPEEREELRIHQYGASGHALPL-VHSPPSSRSTEIWQPPDFPFLGQEGP------RLALPPRHSS 1102

  Fly  1362 VLHKTIPNNATFTTTLTELKKYVVYHVQVLAYTRLGNGALSTPPIRVQTFEDTPGVPSNVSF--- 1423
            .||:.:|....:                               |...:|...|..:||:.:|   
Zfish  1103 YLHRDLPEPPPY-------------------------------PSHSRTVSTTSQLPSSSAFLQL 1136

  Fly  1424 ----PDVSLTMARIIWDVPVDPNGKILAYQVTYTLN---------GSAMLNYS----REFPPS-- 1469
                ..:|.:..|.   .|..|:.|.:..|...||.         |..:|.||    |...||  
Zfish  1137 EAPRTHLSRSPGRF---PPQGPSAKHITMQQAQTLGQLRHTAHGMGVPVLPYSGATTRMGSPSTL 1198

  Fly  1470 ------------------------DRTFRATELLPGKYYSFSCT-AQTRLGWGKIAT------AL 1503
                                    |...:...|.|.:....:.| ..:..|...|..      ::
Zfish  1199 HSESSDGWRSEAQPWMSPRAARKMDLGLQQVVLQPSRLSPLTQTPPSSHAGSPDILVRPPPRPSI 1263

  Fly  1504 VYTTNNRERPQA---PSVPQISRSQIQAHQITFSWTPGRDGFAPLRYYTVEMRENEGRWQPLPER 1565
            :.::.::|.|::   |:....||..:.:...| |.|.|:.|..|...|...|...........:.
Zfish  1264 LRSSRSQEMPESARHPASVSFSRRSLSSSPAT-SPTQGQSGQRPSLSYRAHMAFATAAASYPSQS 1327

  Fly  1566 VDPSLSSFTAVGLRPYMTYQFRIQATNDLGPSAFSRESVIVRTLPAAPAVG--VGGLKV 1622
            ..|...|..|.|..|                   |:.......||:.|:.|  :|.::|
Zfish  1328 PSPPAESSDAFGQMP-------------------SQRRTDEEMLPSEPSPGEHLGAVRV 1367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sdkNP_001284756.1 Ig_3 72..142 CDD:464046
Ig 280..344 CDD:409353 20/82 (24%)
Ig strand B 280..283 CDD:409353 1/2 (50%)
Ig strand C 292..298 CDD:409353 1/9 (11%)
Ig strand E 319..323 CDD:409353 1/3 (33%)
Ig strand F 333..338 CDD:409353 2/4 (50%)
Ig 360..451 CDD:472250 27/91 (30%)
Ig strand B 378..382 CDD:409353 1/3 (33%)
Ig strand C 391..395 CDD:409353 1/3 (33%)
Ig strand E 416..420 CDD:409353 1/3 (33%)
Ig strand F 430..435 CDD:409353 1/4 (25%)
Ig strand G 443..446 CDD:409353 0/2 (0%)
Ig 502..587 CDD:472250 30/89 (34%)
Ig strand B 517..521 CDD:409353 1/3 (33%)
Ig strand C 530..534 CDD:409353 1/3 (33%)
Ig strand E 554..557 CDD:409353 1/2 (50%)
Ig strand F 567..572 CDD:409353 2/4 (50%)
Ig strand G 580..583 CDD:409353 0/2 (0%)
Ig 592..682 CDD:472250 25/179 (14%)
Ig strand B 608..612 CDD:409353 0/3 (0%)
Ig strand C 623..627 CDD:409353 1/28 (4%)
Ig strand E 648..652 CDD:409353 2/3 (67%)
Ig strand F 662..667 CDD:409353 1/4 (25%)
Ig strand G 675..678 CDD:409353 1/2 (50%)
FN3 686..789 CDD:238020 34/124 (27%)
FN3 798..893 CDD:238020 16/97 (16%)
FN3 901..1005 CDD:238020 22/143 (15%)
FN3 <960..>1261 CDD:442628 60/328 (18%)
fn3 1317..1402 CDD:394996 13/84 (15%)
FN3 1415..1507 CDD:238020 24/144 (17%)
FN3 1513..1608 CDD:238020 18/97 (19%)
FN3 1583..>2011 CDD:442628 7/42 (17%)
igsf9baXP_021322057.2 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.