Sequence 1: | NP_001284756.1 | Gene: | sdk / 31017 | FlyBaseID: | FBgn0021764 | Length: | 2265 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_689255.3 | Gene: | robo4 / 560765 | ZFINID: | ZDB-GENE-020809-1 | Length: | 1134 | Species: | Danio rerio |
Alignment Length: | 1113 | Identity: | 234/1113 - (21%) |
---|---|---|---|
Similarity: | 377/1113 - (33%) | Gaps: | 353/1113 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 375 GGQVQLTCDVVGEPTPQVKWFRNAESVDAHIESGRYTLNTDN-TLVIKKLILDDAAMFQCLAI-N 437
Fly 438 EAGENSASTWLRVKTKTAKNRVKRLAQPRILRVRASHAGLGSEKGSESGSSDRRKEFRFASAPIM 502
Fly 503 ELPPQNVTALDGKDATISCR-AVGSPNPNITWIYNETQLVDISSRVQILESGDLLISNIRSVDAG 566
Fly 567 LYICVRANEAGSVKGE-AYLSVLVRTQIIQPPVDTTVLLGLTATLQCKVSSDPSVPYNIDWYREG 630
Fly 631 QSSTPISNSQRIGVQADGQLEIQAVRASDVGSYACVVTSPGGNETRAARLSV----------IEL 685
Fly 686 PFPPSNVKVERLPEPQQRS--INVSWTPGFDGNSP--ISKFIIQRREVSELGP------VPDPLL 740
Fly 741 NWITELSNVSADQRWILLENLKAATVYQFRVSAVNRVGEGSPSEPSNV--VELPQEAPSGPP--V 801
Fly 802 GFVGSARSMSEIITQWQPPLEEHRNGQILGY----ILRYRLFGYNNVPWSYQNITNEAQRNFLIQ 862
Fly 863 ELITWKDYIVQIAAYNNMGVGVYTEGSKIKTKEGVPEAPP------------TNVKVEAINSTAA 915
Fly 916 RCRW---------------TPPNPQQINGINQG-YKIQAWQRRLIDGEWRDIERRMKTVPPSLID 964
Fly 965 PLAEQTAILGGLEKFTEYNISVLCFTDPGDGVASSQVAVMTMDDVPDEVTGLHFDDVSDRSVKVL 1029
Fly 1030 WAPPRASNGILTGYTVRYQVKDRPDTLKSFNLTADD---------TELTVNQLQATTHYWFEIVA 1085
Fly 1086 WTRVGSGIPKTATIQS-GVEPVLPHAPTALALSNIEAFSVVLQFTPGFDGNSSITKWKVEGQTAR 1149
Fly 1150 NMTWFTICEINDPDAETLTVTGL--VPFTQYRLRLSASNVVGSSKPS---EATKDFQTIQARPKH 1209
Fly 1210 PPFNVTVRAMSAQQLRVRWIPLQQTEWYGNPRG----------------YNISYKQLVKTPGTIK 1258
Fly 1259 YVPRSVVIEDHTANSHVLDSLEEWTLYEVKMN------------------ACNDVGCSKESDTAV 1305
Fly 1306 ERTREAVPSYGPL---------DVQANATSSTTVVVQWGEVPRQHRNGQIDGYKVFYAAADRGQQ 1361
Fly 1362 VLHKTIPN 1369 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
sdk | NP_001284756.1 | Ig | 71..157 | CDD:299845 | |
I-set | 72..150 | CDD:254352 | |||
Ig | 172..245 | CDD:299845 | |||
IG_like | 280..356 | CDD:214653 | |||
Ig | 280..343 | CDD:299845 | |||
IG_like | 375..450 | CDD:214653 | 16/76 (21%) | ||
Ig | 378..447 | CDD:143165 | 15/70 (21%) | ||
Ig | 506..587 | CDD:299845 | 27/82 (33%) | ||
IG_like | 506..587 | CDD:214653 | 27/82 (33%) | ||
I-set | 592..682 | CDD:254352 | 29/89 (33%) | ||
Ig | 595..682 | CDD:299845 | 29/86 (34%) | ||
FN3 | 686..789 | CDD:238020 | 22/114 (19%) | ||
FN3 | 798..893 | CDD:238020 | 25/100 (25%) | ||
FN3 | 901..1005 | CDD:238020 | 22/131 (17%) | ||
fn3 | 1011..1094 | CDD:278470 | 16/91 (18%) | ||
FN3 | 1108..1202 | CDD:238020 | 18/98 (18%) | ||
FN3 | 1210..1308 | CDD:238020 | 24/131 (18%) | ||
fn3 | 1317..1402 | CDD:278470 | 11/62 (18%) | ||
FN3 | 1415..1507 | CDD:238020 | |||
FN3 | 1513..1608 | CDD:238020 | |||
fn3 | 1617..1708 | CDD:278470 | |||
FN3 | 1722..1823 | CDD:238020 | |||
FN3 | 1828..1920 | CDD:238020 | |||
FN3 | 1927..2016 | CDD:238020 | |||
robo4 | XP_689255.3 | Ig1_Robo | 70..169 | CDD:143317 | 19/94 (20%) |
I-set | 71..168 | CDD:254352 | 19/93 (20%) | ||
I-set | 175..261 | CDD:254352 | 29/94 (31%) | ||
Ig2_Robo | 177..261 | CDD:143201 | 27/84 (32%) | ||
I-set | 265..350 | CDD:254352 | 29/90 (32%) | ||
Ig | 282..350 | CDD:299845 | 24/73 (33%) | ||
FN3 | 373..448 | CDD:214495 | 18/91 (20%) | ||
FN3 | 472..560 | CDD:238020 | 24/94 (26%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3510 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |