DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sdk and dpr6

DIOPT Version :9

Sequence 1:NP_001284756.1 Gene:sdk / 31017 FlyBaseID:FBgn0021764 Length:2265 Species:Drosophila melanogaster
Sequence 2:NP_001287018.1 Gene:dpr6 / 50296 FlyBaseID:FBgn0040823 Length:396 Species:Drosophila melanogaster


Alignment Length:209 Identity:56/209 - (26%)
Similarity:82/209 - (39%) Gaps:43/209 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   506 PQNVTALDGKDATISCRAVGSPNPNITWI-YNETQLVDISSRV------------QILESGDLLI 557
            |:|||||.||.|.:|||.....|..::|| :.:..::.:.|..            |..|...|.|
  Fly    80 PRNVTALMGKSAYLSCRVRNLANKTVSWIRHRDIHILTVGSYTYTSDQRFQATHHQDTEDWTLQI 144

  Fly   558 SNIRSVDAGLYICVRANEAGSVKGEAYLSVLVRTQIIQPPV------DTTVLLGLTATLQCKVSS 616
            ...:..|||:|.|       .:..:...|..||..::.|..      |..|..|.|..|.|.|..
  Fly   145 KWAQKRDAGMYEC-------QISTQPVRSYFVRLNVVVPTATILGGPDLHVDKGSTINLTCTVKF 202

  Fly   617 DPSVPYNIDWYREGQSSTPISN--SQRIGVQADGQ--------LEIQAVRASDVGSYACVVTSPG 671
            .|..|..|.||...:    :.|  |.|.||....:        |.||....:|.|.|:|   :|.
  Fly   203 SPEPPAYIFWYHHEE----VINYDSSRGGVSVITEKGDVTTSFLLIQNADLADSGKYSC---APS 260

  Fly   672 GNETRAARLSVIEL 685
            ..:..:.|:.|:.:
  Fly   261 NADVASVRVHVLNV 274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sdkNP_001284756.1 Ig 71..157 CDD:299845
I-set 72..150 CDD:254352
Ig 172..245 CDD:299845
IG_like 280..356 CDD:214653
Ig 280..343 CDD:299845
IG_like 375..450 CDD:214653
Ig 378..447 CDD:143165
Ig 506..587 CDD:299845 25/93 (27%)
IG_like 506..587 CDD:214653 25/93 (27%)
I-set 592..682 CDD:254352 27/105 (26%)
Ig 595..682 CDD:299845 27/102 (26%)
FN3 686..789 CDD:238020 56/209 (27%)
FN3 798..893 CDD:238020
FN3 901..1005 CDD:238020
fn3 1011..1094 CDD:278470
FN3 1108..1202 CDD:238020
FN3 1210..1308 CDD:238020
fn3 1317..1402 CDD:278470
FN3 1415..1507 CDD:238020
FN3 1513..1608 CDD:238020
fn3 1617..1708 CDD:278470
FN3 1722..1823 CDD:238020
FN3 1828..1920 CDD:238020
FN3 1927..2016 CDD:238020
dpr6NP_001287018.1 V-set 79..174 CDD:284989 28/100 (28%)
IG_like 80..175 CDD:214653 28/101 (28%)
IG_like 184..271 CDD:214653 26/93 (28%)
IGc2 191..262 CDD:197706 23/77 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.