DRSC/TRiP Functional Genomics Resources

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Protein Alignment sdk and pxdn

DIOPT Version :10

Sequence 1:NP_001284756.1 Gene:sdk / 31017 FlyBaseID:FBgn0021764 Length:2265 Species:Drosophila melanogaster
Sequence 2:NP_001076815.1 Gene:pxdn / 493201 XenbaseID:XB-GENE-923300 Length:1460 Species:Xenopus tropicalis


Alignment Length:1359 Identity:279/1359 - (20%)
Similarity:446/1359 - (32%) Gaps:396/1359 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   205 DIKYAFTHANQLIILSADENDRKGYRAKAINTQLGKEESSAFVHLN--VSGDP----YIEVAPEI 263
            ::||.:.:.|::     ...||:.::..|...||       ::|.|  .:.:|    |:.....:
 Frog   104 NLKYLYLYKNEI-----QSIDRQAFKGLASLEQL-------YLHFNQIETLEPESFNYLPKLERL 156

  Fly   264 IVRPQDVKVKVGTGVVELQCIANAR----PLH-ELETLWLKDGLAVETAGVRHTLNDPWNRTLAL 323
            .:....:...|.....:|:.:...|    .|| :.|.|||.|                   .|.:
 Frog   157 FLHNNRITHLVPGTFSQLESMKRLRLDSNALHCDCEILWLAD-------------------LLKI 202

  Fly   324 LQANSSHSGEYTCQV--RLRSGGYPAVSASARLQILEPPLFFTPMRAETFGEFGGQVQLTCDVVG 386
            ...:.:.....||:.  ||:......::.| .|....|.:...|...:.  .||..|..||...|
 Frog   203 YSESGNAQAAATCEYPRRLQGRSVSTITPS-ELNCERPRITSEPQDVDV--TFGNTVYFTCRAEG 264

  Fly   387 EPTPQVKWFRNAESVDAHIESGRYTLNTDNTLVIKKLILDDAAMFQCLAINEAGENSASTWLRVK 451
            .|.|::.|.||...:....:| |..|..|.||:|:.....|..::||:|.|.|||          
 Frog   265 NPKPEIIWLRNNNELSMKDDS-RLNLLNDGTLMIQNTKETDQGIYQCMAKNVAGE---------- 318

  Fly   452 TKTAKNRVKRLAQPRILRVRASHAGLGSEKGSESGSSDRRKEFRFASAPIMELPPQNVTALDGKD 516
            .||.:..::....|                                :.|...:.|||...|.|:.
 Frog   319 VKTHEVTLRYYGTP--------------------------------ATPTFVIQPQNTEVLVGES 351

  Fly   517 ATISCRAVGSPNPNITWIYNETQLVDISSRVQILESGDLLISNIRSVDAGLYICVRANEAGSVKG 581
            .|:.|.|.|.|:|.:||...:...:....|:.|..||.|.|.|:...|||.|.|...|...::..
 Frog   352 VTLECSATGQPHPRVTWTRGDRTPLPSDPRINITPSGGLYIQNVNQDDAGEYTCFATNSVETIHS 416

  Fly   582 EAYLSVLVRTQIIQPPVDTTVLLGLTATLQCKVSSDPSVPYNIDWYREGQSSTPISNSQRIGVQA 646
            .||:.|....|....|.|..|..|.|....|:...:|. |. |.|.:.|..   :|..:|..|.:
 Frog   417 TAYIIVQAVPQFTVVPQDRNVFEGHTVDFHCEAQGNPK-PV-IAWTKGGNQ---LSVDRRHQVLS 476

  Fly   647 DGQLEIQAVRASDVGSYACVVTSPGGNETRAARLSVIELPFPPSNVKVERLPEPQQRSINVSWTP 711
            .|.|.|..|...|.|.|.|...:..|:::.||:| :::....|....|     |...::.|    
 Frog   477 SGTLRILRVALHDQGQYECQAVNIVGSKSTAAQL-IVQTRVTPVFATV-----PNDMTVEV---- 531

  Fly   712 GFDGNSPISKFIIQRREVSELGPVPDPLLNW------ITELSNVS-ADQRWILLENLKAATVYQF 769
            |.|...|.|         |:..|:  |::.|      :||..... :...::.:.:...|...::
 Frog   532 GTDVQIPCS---------SQGDPL--PIITWNKDGIQVTESGKFHISPHGYLAIRDAGLADQGRY 585

  Fly   770 RVSAVNRVGEGSPSEPSNVVELPQEAPSGPPVGFVGSARSMSEIITQWQPPLEEHRN-------- 826
            ...|.|.:|..|.|...:|: :|:.:.:|.|  ||  |.|:.|.|......:...|.        
 Frog   586 ECVARNPIGYSSVSMVLSVL-VPEVSRTGDP--FV--ATSIIEAIATVDRAINSTRTHLFDSRPR 645

  Fly   827 --GQILGYILRYRLFGYNNVPW-------------SYQNITNEAQRNFLI---------QELITW 867
              |.:|.      ||.|...|:             :.|.|.:..|...::         .:|:: 
 Frog   646 SPGDLLA------LFRYPRDPYTVEQARAAEIFERTLQLIQDHVQSGLMVDLNGTSYHYNDLVS- 703

  Fly   868 KDYIVQIAAYNNMGVGVYTE---------GSKIKTKEGV---PEAPPTNVKVEAINSTAARCRWT 920
            ..|:..||  |..|...:..         ..|.:|.:|.   .:.|.....:.|...........
 Frog   704 PQYLNMIA--NLSGCATHRRINNCSNMCFHQKYRTHDGTCNNLQHPMWGASLTAFERLLKSVYEN 766

  Fly   921 PPN-PQQINGINQGYKIQAWQRRLIDGEWRDIERRMKT--VPPSLIDPLAEQTAILGGLEKFTEY 982
            ..| |:.|:|            |:.:|....:.|.:.|  :....|.|..:.|.:|....:|.::
 Frog   767 GFNLPRGISG------------RIYNGFPLPLPRLVSTTLIGTHTITPDEQFTHMLMQWGQFLDH 819

  Fly   983 NI------------------SVLCFTD---------PGDGVASSQVAVMTMDDVPDEVTGLHFDD 1020
            ::                  ||:|..|         |.|....:....|:|.. ...|.|.....
 Frog   820 DLDSTVVALSQARFSDGQDCSVVCTNDAPCFPIMVPPNDPRVRNNARCMSMVR-SSPVCGSGMTS 883

  Fly  1021 VSDRSVKVLWAPPRASNGILTGYTVRYQVKDRPDTLKSFNLTADDTELTVNQLQATTHYWFEIVA 1085
            :...||.     ||.....||.|.         |....:..:..::    |:::.:..:      
 Frog   884 LLMNSVY-----PREQMNQLTSYI---------DASNVYGSSDHES----NEIRDSASH------ 924

  Fly  1086 WTRVGSGIPKTATIQSGVEPVLPHA---PTALALSNIEAFSVVLQFTPG-FDGNSSITKWKVEGQ 1146
                 .|:.|...:|...:|:||.|   ||.......|  |.:..|..| ...|..:      |.
 Frog   925 -----RGLLKQGIVQRSGKPLLPFATGPPTECMRDENE--SPIPCFLAGDHRANEQL------GL 976

  Fly  1147 TARNMTWFTICEINDPDAETLTVTGLVPFTQYRLRLSASNVVGSSKPSEATKDFQTIQARPKHPP 1211
            |:.:..||.  |.|....|.             |||:..            .|..||        
 Frog   977 TSMHTLWFR--EHNRIATEL-------------LRLNPH------------WDGDTI-------- 1006

  Fly  1212 FNVTVRAMSAQQLRV---RWIPLQQTEWYGNPRGYNISYKQLVKTPGTIKYVPRSVVIEDHTANS 1273
            ::.|.:.:.||...:   .|:|                     |..|.:.               
 Frog  1007 YHETRKIVGAQMQHITYSHWLP---------------------KIFGDVG--------------- 1035

  Fly  1274 HVLDSLEEWTLYEVKMNACNDVGCSKESDTAVERTREAV--PSYGPLDVQANATSSTTVVVQWGE 1336
              :..|.|:..|:..:||    |...|..||..|....:  |....||.:...       :..|.
 Frog  1036 --MKMLGEYKSYDPNVNA----GILNEFATAAFRFGHTLINPILYRLDEKFEP-------IPQGH 1087

  Fly  1337 VPRQHR----------NGQIDGYKVFYAAADRGQ-QVLHKTIPNNATFTTTLTELKKYVVYHVQV 1390
            || .||          .|.||...       ||. .|..|....:....|.||| |.:.:.|...
 Frog  1088 VP-LHRAFFSPFRIVNEGGIDPLL-------RGLIGVAAKMRVTSQLLNTELTE-KLFSMAHAVA 1143

  Fly  1391 LAYTRLG------NGALSTPPIR----------VQTFEDTPGVPSNVSFPDVSLTMARI 1433
            |....|.      :|   .||..          ||||:|   :.:.:..|||...:.|:
 Frog  1144 LDLAALNVQRGRDHG---IPPYHDFRVFCNLSTVQTFDD---LRNEIKNPDVREKLKRL 1196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sdkNP_001284756.1 Ig_3 72..142 CDD:464046
Ig 280..344 CDD:409353 14/70 (20%)
Ig strand B 280..283 CDD:409353 1/2 (50%)
Ig strand C 292..298 CDD:409353 2/5 (40%)
Ig strand E 319..323 CDD:409353 1/3 (33%)
Ig strand F 333..338 CDD:409353 2/4 (50%)
Ig 360..451 CDD:472250 27/90 (30%)
Ig strand B 378..382 CDD:409353 1/3 (33%)
Ig strand C 391..395 CDD:409353 0/3 (0%)
Ig strand E 416..420 CDD:409353 2/3 (67%)
Ig strand F 430..435 CDD:409353 2/4 (50%)
Ig strand G 443..446 CDD:409353 0/2 (0%)
Ig 502..587 CDD:472250 28/84 (33%)
Ig strand B 517..521 CDD:409353 1/3 (33%)
Ig strand C 530..534 CDD:409353 1/3 (33%)
Ig strand E 554..557 CDD:409353 1/2 (50%)
Ig strand F 567..572 CDD:409353 2/4 (50%)
Ig strand G 580..583 CDD:409353 0/2 (0%)
Ig 592..682 CDD:472250 27/89 (30%)
Ig strand B 608..612 CDD:409353 0/3 (0%)
Ig strand C 623..627 CDD:409353 1/3 (33%)
Ig strand E 648..652 CDD:409353 2/3 (67%)
Ig strand F 662..667 CDD:409353 2/4 (50%)
Ig strand G 675..678 CDD:409353 0/2 (0%)
FN3 686..789 CDD:238020 20/109 (18%)
FN3 798..893 CDD:238020 25/135 (19%)
FN3 901..1005 CDD:238020 21/133 (16%)
FN3 <960..>1261 CDD:442628 58/334 (17%)
fn3 1317..1402 CDD:394996 23/101 (23%)
FN3 1415..1507 CDD:238020 4/19 (21%)
FN3 1513..1608 CDD:238020
FN3 1583..>2011 CDD:442628
pxdnNP_001076815.1 leucine-rich repeat 38..56 CDD:275380
leucine-rich repeat 57..80 CDD:275380
LRR <90..>208 CDD:443914 23/134 (17%)
leucine-rich repeat 105..128 CDD:275378 5/27 (19%)
leucine-rich repeat 129..152 CDD:275378 6/29 (21%)
leucine-rich repeat 153..176 CDD:275378 2/22 (9%)
leucine-rich repeat 177..189 CDD:275378 2/11 (18%)
LRRCT 185..236 CDD:214507 14/70 (20%)
I-set 239..326 CDD:400151 30/99 (30%)
Ig strand B 256..260 CDD:409490 1/3 (33%)
Ig strand C 269..273 CDD:409490 0/3 (0%)
Ig strand F 307..312 CDD:409490 2/4 (50%)
Ig strand G 321..324 CDD:409490 1/2 (50%)
I-set 335..422 CDD:400151 29/86 (34%)
Ig strand B 352..356 CDD:409389 1/3 (33%)
Ig strand C 365..369 CDD:409389 1/3 (33%)
Ig strand E 388..392 CDD:409389 2/3 (67%)
Ig strand F 402..407 CDD:409389 2/4 (50%)
Ig strand G 415..418 CDD:409389 0/2 (0%)
Ig3_Peroxidasin 439..512 CDD:143222 23/78 (29%)
Ig strand B 443..447 CDD:143222 0/3 (0%)
Ig strand C 456..460 CDD:143222 1/4 (25%)
Ig strand E 478..482 CDD:143222 2/3 (67%)
Ig strand F 492..497 CDD:143222 2/4 (50%)
Ig strand G 506..509 CDD:143222 1/2 (50%)
Ig4_Peroxidasin 535..603 CDD:143223 14/78 (18%)
Ig strand B 535..539 CDD:143223 0/3 (0%)
Ig strand C 548..552 CDD:143223 0/3 (0%)
Ig strand E 570..574 CDD:143223 0/3 (0%)
Ig strand F 584..589 CDD:143223 0/4 (0%)
Ig strand G 598..601 CDD:143223 1/2 (50%)
peroxidasin_like 856..1295 CDD:188658 94/478 (20%)
VWC 1402..1452 CDD:214564
Blue background indicates that the domain is not in the aligned region.

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