DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sdk and tutl

DIOPT Version :9

Sequence 1:NP_001284756.1 Gene:sdk / 31017 FlyBaseID:FBgn0021764 Length:2265 Species:Drosophila melanogaster
Sequence 2:NP_001303307.1 Gene:tutl / 46015 FlyBaseID:FBgn0010473 Length:1536 Species:Drosophila melanogaster


Alignment Length:1922 Identity:369/1922 - (19%)
Similarity:609/1922 - (31%) Gaps:676/1922 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 QQQNSIVQQQQLQAPR--------------FTTHPSSSGSIVSEGSTKILQCHALGYPQPTYRWL 108
            |||    |.|.|:.|.              .||.|:|.....|...|                  
  Fly    28 QQQ----QSQPLEIPEQRASKCRGDIDRTTTTTIPASKTLTASPAKT------------------ 70

  Fly   109 KDGVPVGDFSSSQFYRFHSTRREDAGSYQCI-ARNDAGS----IFSEKSDVVVAYMGIFENTTEG 168
                  ..|:.....|..|.||.: ||..|: .|...||    .......|:|:.:.:.....:.
  Fly    71 ------AAFTVKTTRRRRSRRRAE-GSSICVPIRRGQGSTPTPTIQVLQFVLVSLLALLAKNAQA 128

  Fly   169 --------RLTVISGHPAIF----DMPPIESIP---------------VPSVMWQ---------- 196
                    .:|.|.|...||    :.|....:|               :|..:|.          
  Fly   129 HNIPEDAVHITAILGEGVIFNCHVEFPNDHPVPYVLQWDKKVSETGSDLPIYIWYESYPEHIEEG 193

  Fly   197 --------SEDGPLNYDIKYAFTHANQLIILSADENDRKGYRAKAI--NTQLGKEESSAFVHLNV 251
                    |:|.|..         :..|.:.:..|:|:..|..|.:  |....:.::..:.||:|
  Fly   194 YKGRVSRVSQDSPFG---------SASLNLTNIRESDQGWYECKVVFLNRDPKQHKNGTWFHLDV 249

  Fly   252 SGDPYIEVAPEIIVRPQDVKVKVGTGVVELQCIANARPLHELETLWLKDGLAVETAGVRHTLNDP 316
            ...|...|.||.|     :.|.:|..:: |.|.|:..|..|:  ||.||...|:.:......|| 
  Fly   250 HAPPRFSVTPEDI-----IYVNLGDSII-LNCQADGTPTPEI--LWYKDANPVDPSPTVGIFND- 305

  Fly   317 WNRTLALLQANSSHSGEYTCQVRLRSGGYPAVSASARLQILEPPLFFTPMRAETFGEFGGQVQLT 381
             ...|.:........|||||..|   .|...||.:||:.|....:...|...:|..| |.:|..:
  Fly   306 -GTELRISTIRHEDIGEYTCIAR---NGEGQVSHTARVIIAGGAVIMVPPTNQTKLE-GEKVIFS 365

  Fly   382 CDVVGEP-TPQVKWFRNAESVD--AHIESGRYTLNTDNTLVIKKLILDDAAMFQCLAINEAGE-N 442
            |:....| ...|:|:|....|.  |.:|: |.|:..|.:|:|..:..||:..:.|...|..|: .
  Fly   366 CEAKAMPGNVTVRWYREGSPVREVAALET-RVTIRKDGSLIINPIKPDDSGQYLCEVTNGIGDPQ 429

  Fly   443 SASTWLRVK-------TKTAKNRVKRLAQPRILRVRASHAGLGSEKGSESGSSDRRKEFRFASAP 500
            |||.:|.|:       |.|.:....|||                                     
  Fly   430 SASAYLSVEYPAKVTFTPTVQYLPFRLA------------------------------------- 457

  Fly   501 IMELPPQNVTALDGKDATISCRAVGSPN-PNITWIYNETQLVDISSR-VQILESGDLLISNIRSV 563
                            ..:.|....||. ..:||..::..|.....: :.::.:|.||.:.:...
  Fly   458 ----------------GVVQCYIKSSPQLQYVTWTKDKRLLEPYQMKDIVVMANGSLLFTRVNEE 506

  Fly   564 DAGLYICVRANEAGSVKGEAYLSVLVRTQIIQPP---VDTTVL----LGLTATLQC-KVSSDPSV 620
            ..|.|.|...|..|:......:.||||    :||   |:...|    :|.:..:.| .:.::.:.
  Fly   507 HQGQYACTPYNAQGTAGASGVMDVLVR----KPPAFTVEPETLYQRKVGDSVEMHCDALEAEGTE 567

  Fly   621 PYNIDWYREGQSSTPISNSQRIGVQ-ADGQLEIQAVRASDVGSYACVVTSPGGNETRAARLSVIE 684
            ...|.|.|  |....::.|||..:: :.|.:.|:.:|..|.|.|.|||:    ||. |..::|.:
  Fly   568 RPTIKWQR--QEGEQLTESQRNRIKISGGNITIENLRREDFGYYQCVVS----NEV-ATLMAVTQ 625

  Fly   685 L------PFPPSNVKVERLPEPQQRSINVSWTPGFDGNSPISK-FIIQRREVSELGPVPDPLLNW 742
            |      |..|.|:    ..:..:.||.:.|.||:.|.|...: :.|..||..        :.:|
  Fly   626 LVIEGTQPHAPYNI----TGKATESSITLQWLPGYSGGSEYKQDYTIWFREAG--------VNDW 678

  Fly   743 ITELSNVSADQRWILLENLKAATVYQFRVSAVNRVGEGSPSEPSNVVELPQEAPSGPPVGFVGSA 807
            .| :|...:....:.:..|.:.|.|:|:|...|.:|:|..|:...|..| ::||:.|        
  Fly   679 QT-ISVTPSGSTQVTINGLASGTTYEFQVVGRNVLGDGMMSKVMTVRTL-EDAPAAP-------- 733

  Fly   808 RSMSEIITQWQPPLEEHRNGQILGYILRYRLFGYNNVPWSYQNITNEAQRNFLIQELITWKDYIV 872
               ..:....|||                        ...:|.:.:||       :|:.:.|...
  Fly   734 ---RNVKAATQPP------------------------DSFFQLMPDEA-------DLLAYFDIYF 764

  Fly   873 QIAAYNNMGVGVYTEGSKIKTKEGVPEAPPTNVKVEAINSTAARCRWTPPNPQQINGINQGYKIQ 937
            ..   ::.|..||:. .|::.| |....||.||.|..: |......|..|       :.:.:.::
  Fly   765 HT---DSRGTLVYSP-PKLRVK-GPKPGPPRNVSVTEV-SNGFLITWQSP-------LERAHIVK 816

  Fly   938 AWQ-RRLIDGEWRDIERRMKTVPPSLIDPLAEQTAILGGLEKFTEYNISVLCFTDPGDGVASSQV 1001
            .:. :...|.:|:.:.|..  :.|.....|.:.  ::||    ..|...||         |:|:.
  Fly   817 FYTIKYRTDAQWKTLNRGQ--IRPEETQYLVKN--LVGG----RTYYFRVL---------ANSEK 864

  Fly  1002 AVMTMDDVPDEVTGLHFDDVSDRSVKVLWAPPRASNGILTGYTVR------------------YQ 1048
            :..:.|:|...|                  |.|..:..:|...|.                  ..
  Fly   865 SYESSDEVKFPV------------------PARVKHKAITAGVVGGILFFIVAIILSVCAVKICN 911

  Fly  1049 VKDRPDTLKSFNLTADDTELT-VNQLQATTHYWFEIVAWTRVGSGIPKTATIQSGVEPVLPHAPT 1112
            .:.|....|.||:.|  ..:| ...:.|..|:...           ..|.:|.||..|:..:..|
  Fly   912 KRKRRKQEKEFNMVA--CRITDARNIAANNHHLHN-----------RSTGSISSGQVPLKKYKQT 963

  Fly  1113 ALALSNIEAFSVV----------------LQFTPGF-DGNSSITKWKVEGQTARNMTWFTICEIN 1160
              .:|::.|..:.                :..:|.. ||:..      :|...|..:...|....
  Fly   964 --RISSLTAILIAILHWIWPPDRCTNCHSIYSSPNLEDGDED------DGGGGRRRSVSRIQRSL 1020

  Fly  1161 DP----DAETLTVTGLVPFTQYRLRLSASNVVG-----------SSKPSE------ATKDFQTIQ 1204
            |.    |.|.::..|   ::|..|.....:||.           |.|.|.      :.::|.|.:
  Fly  1021 DGRFVLDVEGVSKLG---YSQQTLESGNVDVVDGGLFERRNSNVSQKSSSDDGGFLSRRNFITAR 1082

  Fly  1205 ARPKHPPFNVTVRAMSAQQLRVRWIPLQQTEWYGNPRGY-----NISYKQLVKTPGTIKYVPRSV 1264
            |..:.|     :.|.|:|      :.||...  .:.||:     .|..||....|.:..|...:|
  Fly  1083 ASWRRP-----LVASSSQ------LSLQSAA--DSARGFLQGLLKIGAKQSAVPPNSQSYFDEAV 1134

  Fly  1265 -------VIEDHTANSHVLDSLEEWTLYEVKMNACNDVGCSKESDTAVERTREAVPSYGPLDVQA 1322
                   |:..:|:::::..:                          .:|:|       ||.:..
  Fly  1135 SGARYQNVLRPYTSSNNLYGN--------------------------ADRSR-------PLHINT 1166

  Fly  1323 NATSSTTVVVQWGEVPRQHRNGQIDGYKVFYAAADRGQQVLHKTIPNNATFTTTLTELKKYVVYH 1387
            .:.|.:.                              ||.|:.....:..|:::..:|:.    |
  Fly  1167 ISGSLSQ------------------------------QQQLYTPSRISRIFSSSPQQLQP----H 1197

  Fly  1388 VQVLAYTRLGNGALSTPPIRVQTFEDTPGVPSNVSFPDVSLTMARIIWDVPVDPNGKILAYQVTY 1452
            .|.|..:..|:||..|                  .|.|:|..         ..||.   |.:.::
  Fly  1198 HQQLLLSSGGSGAYPT------------------HFSDLSTV---------YPPNS---AERSSH 1232

  Fly  1453 TLNGSAMLNYSREFP-----------------------------PSDRTFRATELLPGKYYSFSC 1488
            .|: |....||:|.|                             ||..::|:       ||....
  Fly  1233 NLS-SRYRYYSQELPSLRTIQEETRRQQQQKQHPLEDHFVPLQLPSPPSWRS-------YYQSQA 1289

  Fly  1489 TAQTRLGWGKIATALVYTTNNRERPQAPSVPQISRSQIQAHQITFSWTPG-----------RDGF 1542
            :.:.|..|.....:.:::...::......:||::.:      :..|..||           ..||
  Fly  1290 SYRPRTRWYPRHHSRLFSNRQQQHEMLSPLPQLNLN------LRNSMNPGGLEASPESRSSSSGF 1348

  Fly  1543 APLRYYTVEMRENEGRWQPLPE-RVDPS-------LSSFTAVGLRPYMTYQF------------- 1586
            ....  |.....:...|:.||. |..||       .....|.|..|:.:|.:             
  Fly  1349 GSKN--TSNHPGSTSEWRLLPPYRAPPSPPKHSGYFGGQQAQGQTPHGSYSYPRATTPPYTMAHW 1411

  Fly  1587 -----RIQATNDLGPSAFSRESVIVRTLPAAPAVGVGGLKVVPITTTSVRVQWSALETALWNGDA 1646
                 |:.|..|             ..||.||.         |:...||                
  Fly  1412 LEMISRLNAATD-------------SNLPKAPC---------PVDVGSV---------------- 1438

  Fly  1647 STGGYRILYQQLSDFPTALQSTPKTDVHGINENSVVLSDLQQDRNYEIVVLPFNSQGPGPATPPA 1711
             .|.|        :|..| ..||...           |.|::|.|..|...|::....||.:...
  Fly  1439 -DGHY--------EFDPA-TPTPSAS-----------SMLREDLNLHIDTHPYHHHTLGPLSGSL 1482

  Fly  1712 ----AVYVGEA-----VPTGEPRAVDAAPISSTEVRL 1739
                |.|.|.|     :|...||      ..:.||||
  Fly  1483 LHSHAPYGGGARKQRSLPAHLPR------YDNVEVRL 1513

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sdkNP_001284756.1 Ig 71..157 CDD:299845 19/104 (18%)
I-set 72..150 CDD:254352 18/96 (19%)
Ig 172..245 CDD:299845 17/111 (15%)
IG_like 280..356 CDD:214653 24/75 (32%)
Ig 280..343 CDD:299845 19/62 (31%)
IG_like 375..450 CDD:214653 24/78 (31%)
Ig 378..447 CDD:143165 22/72 (31%)
Ig 506..587 CDD:299845 14/82 (17%)
IG_like 506..587 CDD:214653 14/82 (17%)
I-set 592..682 CDD:254352 25/98 (26%)
Ig 595..682 CDD:299845 25/95 (26%)
FN3 686..789 CDD:238020 25/103 (24%)
FN3 798..893 CDD:238020 13/94 (14%)
FN3 901..1005 CDD:238020 20/104 (19%)
fn3 1011..1094 CDD:278470 13/101 (13%)
FN3 1108..1202 CDD:238020 21/131 (16%)
FN3 1210..1308 CDD:238020 16/109 (15%)
fn3 1317..1402 CDD:278470 14/84 (17%)
FN3 1415..1507 CDD:238020 19/120 (16%)
FN3 1513..1608 CDD:238020 21/131 (16%)
fn3 1617..1708 CDD:278470 17/90 (19%)
FN3 1722..1823 CDD:238020 6/18 (33%)
FN3 1828..1920 CDD:238020
FN3 1927..2016 CDD:238020
tutlNP_001303307.1 V-set 137..250 CDD:284989 20/121 (17%)
IG_like 137..229 CDD:214653 16/100 (16%)
I-set 253..341 CDD:254352 31/100 (31%)
IGc2 268..331 CDD:197706 21/70 (30%)
I-set 346..437 CDD:254352 27/92 (29%)
Ig 349..437 CDD:299845 27/89 (30%)
Ig 459..530 CDD:299845 14/70 (20%)
IG_like 549..628 CDD:214653 23/85 (27%)
IGc2 551..617 CDD:197706 19/71 (27%)
FN3 633..725 CDD:238020 26/104 (25%)
FN3 786..874 CDD:238020 22/112 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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