DRSC/TRiP Functional Genomics Resources

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Protein Alignment sdk and klg

DIOPT Version :9

Sequence 1:NP_001284756.1 Gene:sdk / 31017 FlyBaseID:FBgn0021764 Length:2265 Species:Drosophila melanogaster
Sequence 2:NP_524454.2 Gene:klg / 42707 FlyBaseID:FBgn0017590 Length:545 Species:Drosophila melanogaster


Alignment Length:533 Identity:117/533 - (21%)
Similarity:190/533 - (35%) Gaps:125/533 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   323 LLQANSSHSGEYTCQVRLRSGG----------YPAVSASARLQILEPPLFFTPMRAETF-GEFGG 376
            ||.|::. ||.:..:..:.:.|          ..||:||.....|  |.|.:  |..|: ...|.
  Fly    57 LLHAHAG-SGGFAVEAAISNRGSNSRSMSNVQQSAVAASTLTATL--PRFLS--RGHTYRAVVGD 116

  Fly   377 QVQLTCDVVGEPTPQVKWFRNAESVDAH----IESGRYTLNTDNTLVIKKLILDDAAMFQCLAIN 437
            .:.|.|.|.......:.|.|....:.|.    ....|..|.....|.|..|...||..:.|...:
  Fly   117 TLVLPCQVENLGNFVLLWRRGTNVLTASNIMVTRDERVRLIDGYNLEISDLEPQDAGDYVCQISD 181

  Fly   438 EAGENSASTWLRVKTKTAKNRVKRLAQPRILRVRASHAGLGSEKGSESGSSDRRKEFRFASAPIM 502
            :...:...|            |:.|..|.:..:            ..||....||          
  Fly   182 KINRDQVHT------------VEILVPPSVRAI------------PTSGQLQARK---------- 212

  Fly   503 ELPPQNVTALDGKDATISCRAVGSPNPNITWIYNETQLVDISSRVQILESGDLL-ISNIRSVDAG 566
                       |...|:.|:..|:|.|:|.|    |:....:.....:..|.:| :..:....||
  Fly   213 -----------GGPITLECKGSGNPVPSIYW----TKKSGANKSTARIGDGPILTLEKLERQQAG 262

  Fly   567 LYICVRANEAGSVKGEAYLSVLVRTQIIQPP---VDTTVL---LGLTATLQCKVSSDPSVPYNID 625
            :|.|...|..|..     ::|.:|..::.||   |:.:.:   .|..|.|.|.|.:||..  .:.
  Fly   263 VYQCTADNGVGDP-----VTVDMRLDVLYPPDIQVEKSWIHSGEGFEAKLVCIVFADPVA--TVS 320

  Fly   626 WYREGQSSTPISNSQR--IGVQAD-GQLEIQAVRASDVGSYACVVTSPGGNETRAARLS----VI 683
            ||   |:|.||.::.|  :..:|: ..|.|:.::..|.|:|:||..:..|...:...||    ..
  Fly   321 WY---QNSFPIQSTDRRIMATRANRHMLTIRHIQQEDFGNYSCVADNSLGRSRKYMELSGRPGAA 382

  Fly   684 ELPFPPSNVKVERLPEPQQRSINVSWTPGFDGNSPIS--KFIIQRREVSE------------LGP 734
            |...|    |..|.|:    |.|::|.  .|...|:.  :.:.:|.:::|            |.|
  Fly   383 EFYSP----KWGRSPD----SYNLTWK--IDSYPPLEEVRLLYRRVQMNETYQQPGRWHDFILTP 437

  Fly   735 VPDPLLNWITELSNVSADQRWILLENLKAATVYQFRVSAVNRVGEGSPSEPSNVVELPQEAPSGP 799
            ...|....:|.:.:.:       ::||.....|:..|.|.||.|....|:....|........||
  Fly   438 EHRPASEPLTHIMSYT-------IKNLHPGGYYEAIVQAKNRYGWNEVSDIFQFVVATNSQDIGP 495

  Fly   800 -PVGFVGSARSMS 811
             ....|.|::|.|
  Fly   496 EDAEVVASSKSRS 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sdkNP_001284756.1 Ig 71..157 CDD:299845
I-set 72..150 CDD:254352
Ig 172..245 CDD:299845
IG_like 280..356 CDD:214653 10/42 (24%)
Ig 280..343 CDD:299845 5/19 (26%)
IG_like 375..450 CDD:214653 16/78 (21%)
Ig 378..447 CDD:143165 14/72 (19%)
Ig 506..587 CDD:299845 17/81 (21%)
IG_like 506..587 CDD:214653 17/81 (21%)
I-set 592..682 CDD:254352 28/102 (27%)
Ig 595..682 CDD:299845 28/99 (28%)
FN3 686..789 CDD:238020 24/116 (21%)
FN3 798..893 CDD:238020 6/15 (40%)
FN3 901..1005 CDD:238020
fn3 1011..1094 CDD:278470
FN3 1108..1202 CDD:238020
FN3 1210..1308 CDD:238020
fn3 1317..1402 CDD:278470
FN3 1415..1507 CDD:238020
FN3 1513..1608 CDD:238020
fn3 1617..1708 CDD:278470
FN3 1722..1823 CDD:238020
FN3 1828..1920 CDD:238020
FN3 1927..2016 CDD:238020
klgNP_524454.2 DUF1370 63..>124 CDD:284518 15/65 (23%)
IG_like 109..195 CDD:214653 18/97 (19%)
Ig 118..191 CDD:143165 15/84 (18%)
IG_like 205..274 CDD:214653 20/93 (22%)
IGc2 213..273 CDD:197706 16/63 (25%)
IGc2 301..367 CDD:197706 22/70 (31%)
FN3 392..486 CDD:238020 21/106 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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