DRSC/TRiP Functional Genomics Resources

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Protein Alignment sdk and dpr15

DIOPT Version :9

Sequence 1:NP_001284756.1 Gene:sdk / 31017 FlyBaseID:FBgn0021764 Length:2265 Species:Drosophila melanogaster
Sequence 2:NP_001287299.1 Gene:dpr15 / 41473 FlyBaseID:FBgn0037993 Length:662 Species:Drosophila melanogaster


Alignment Length:597 Identity:134/597 - (22%)
Similarity:197/597 - (32%) Gaps:173/597 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   261 PEIIVRPQDVKVKVGTGVVELQCIANARPLHELETLWL--KDG--LAVETA---------GVRHT 312
            |..|...|.:..:.||... |.|  |.:.|.:....||  :||  |.|:..         .|...
  Fly   190 PPTIDDYQTIISQAGTHAY-LPC--NVKQLVKKPISWLRMRDGHILTVDQTTFIADQRFQSVFSP 251

  Fly   313 LNDPWNRTLALLQANSSHSGEYTCQVRLRSGGYPAVSASARLQILEPPLFFTPMRAETFGE---- 373
            ..:.|:..:..:|...  .|.|.|||...    |..||...|:|:||       :.|..||    
  Fly   252 NPERWSLQIKYVQLKD--EGTYECQVSTE----PKASAIVHLRIVEP-------KTELIGESTRH 303

  Fly   374 --FGGQVQLTCDV--VGEPTPQVKWFRNAESVDAHIESGRYTLNTDNTLVIKKLILDDAAMFQCL 434
              .|.||:|.|.:  ..||...:.||.|.:.:..|...|..|       .|:::.|         
  Fly   304 VKAGSQVKLRCIISQALEPPLFINWFYNQKQIYLHNRRGWRT-------EIERIDL--------- 352

  Fly   435 AINEAGENSASTWLRVKTKTAKNRVKRL----AQPRILRVRASHAGLGSEKGSESGSSDRRKEFR 495
               .|...:.||.....|.||.......    |.|       |....||.:|:.| |........
  Fly   353 ---PAEVPTTSTTTTTTTTTASTTTTTTSTTPATP-------STTATGSTEGATS-SETLNGLVT 406

  Fly   496 FASAPIMELPPQNVTALDGKDATISCRAVGSPNPNITWIYNETQLVDISSRVQILESGDLLISNI 560
            ...:.|::...||..:..|..|.::             :..||....:.:.|:...|     ::.
  Fly   407 ITRSYILDAISQNDVSELGAAAGVA-------------VATETSTAQLLTEVEATSS-----TSG 453

  Fly   561 RSVDAGLYICV-RANEAGSVKGEAYLSVLVRTQIIQPPVDTTVLLGLTATLQCKVSSDPSVPYNI 624
            .|..|||.... .|..||:..|                 .||...|.:|......|:        
  Fly   454 TSTGAGLLASTSAAYAAGAAAG-----------------ITTAATGDSAATAATTSA-------- 493

  Fly   625 DWY----------REGQSSTPISNSQRIGVQADGQLEIQAVRASDVGSYACVVTSPGGNETRAAR 679
             |.          ....::|.:.:|..|.......|.|.||...|.|:|.|   ||..:..|...
  Fly   494 -WLTTMDAEAATTAATTTTTMLPSSSFIKQITTASLIIPAVVKLDSGNYTC---SPSNSAPRTIV 554

  Fly   680 LSVIELPFPPSNVKVERLPEPQQRSINVSWTP--GFDGNSPISKFIIQRREVSELGPVPDPLLNW 742
            |.|:...:..|.:|          |.:|||:.  |..|       .:..|.||.|     ..|.|
  Fly   555 LHVLNGEYSASAIK----------SGSVSWSALIGCHG-------YLHWRNVSTL-----LTLLW 597

  Fly   743 ITELSNVSADQRWILLENL--KAATVYQFRVSAVNRVGEGSPSEPSNVVELPQEAPSGPPVGF-- 803
            |.:.    |..|.|...|.  ||.|    |.|.: |.|:|:.::.:.        .:||..|.  
  Fly   598 IIKF----ALARDICQPNATSKATT----RTSLL-RAGDGATADVTR--------ETGPKSGASF 645

  Fly   804 --VGSARSMSEI 813
              |.|:.|.:::
  Fly   646 HRVSSSISATKV 657

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sdkNP_001284756.1 Ig 71..157 CDD:299845
I-set 72..150 CDD:254352
Ig 172..245 CDD:299845
IG_like 280..356 CDD:214653 22/88 (25%)
Ig 280..343 CDD:299845 18/75 (24%)
IG_like 375..450 CDD:214653 18/76 (24%)
Ig 378..447 CDD:143165 15/70 (21%)
Ig 506..587 CDD:299845 16/81 (20%)
IG_like 506..587 CDD:214653 16/81 (20%)
I-set 592..682 CDD:254352 21/99 (21%)
Ig 595..682 CDD:299845 21/96 (22%)
FN3 686..789 CDD:238020 27/106 (25%)
FN3 798..893 CDD:238020 6/20 (30%)
FN3 901..1005 CDD:238020
fn3 1011..1094 CDD:278470
FN3 1108..1202 CDD:238020
FN3 1210..1308 CDD:238020
fn3 1317..1402 CDD:278470
FN3 1415..1507 CDD:238020
FN3 1513..1608 CDD:238020
fn3 1617..1708 CDD:278470
FN3 1722..1823 CDD:238020
FN3 1828..1920 CDD:238020
FN3 1927..2016 CDD:238020
dpr15NP_001287299.1 IG_like 197..289 CDD:214653 25/100 (25%)
V-set 204..290 CDD:284989 24/94 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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