DRSC/TRiP Functional Genomics Resources

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Protein Alignment sdk and CG7166

DIOPT Version :9

Sequence 1:NP_001284756.1 Gene:sdk / 31017 FlyBaseID:FBgn0021764 Length:2265 Species:Drosophila melanogaster
Sequence 2:NP_001262181.1 Gene:CG7166 / 40401 FlyBaseID:FBgn0037107 Length:467 Species:Drosophila melanogaster


Alignment Length:482 Identity:116/482 - (24%)
Similarity:163/482 - (33%) Gaps:144/482 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   249 LNVSGDPYI-------EVAPEIIVRPQDVKVKVGTGVVELQCIANARPLHELETLWLKDGLAVET 306
            |::.|..:|       ..||:.:.|....||.||. .:||.|  ..:.|.....||.| |.:|.|
  Fly    20 LSLIGGSFILPENDPPTTAPKFLSRGHLYKVIVGE-TIELPC--KVQNLGSFVLLWRK-GSSVLT 80

  Fly   307 AG-------VRHTLNDPWNRTLALLQAN---SSHSGEYTCQVRLRSGGYPAVSASARLQILEPP- 360
            ||       .|..:...:|     ||.|   :..:|:|.||:    |..........::||.|| 
  Fly    81 AGHLKITRDQRFKIVGDYN-----LQINGVKTQDAGDYICQL----GDQENRDQVHTVEILVPPT 136

  Fly   361 LFFTPMRAETFGEFGGQVQLTCDVVGEPTPQVKWFRNAESVDAHIESGRYTLNTDNTLVIKKLIL 425
            |...|...:.....|..|.|.|...|.|.|.:.||:.      .:.||...|:..:||:::.:..
  Fly   137 LRALPHNGQVTARKGSTVTLECKASGNPVPTIFWFKK------DVFSGPTHLSDSSTLILENVDR 195

  Fly   426 DDAAMFQCLAINEAGENSASTWLRVKTKTAKNRVKRLAQPRILRVRASHAGLGSEKGSESGSSDR 490
            ..|..:||.|.|                ..|:||....|..||                      
  Fly   196 HHAGTYQCSADN----------------GVKDRVSMDIQLTIL---------------------- 222

  Fly   491 RKEFRFASAPIMELPPQNVTALDGKDATISCRAVGSPNPNITWIYNETQLVDISSRVQILESGD- 554
                   |.|.:.:....|.|.:|.|..:.|...|..|..:.| |..:.|:|.:.|..:....| 
  Fly   223 -------SPPEITVEKSWVHASEGYDVELVCIVHGDVNSEMLW-YQNSFLLDATDRRSMYPRDDR 279

  Fly   555 --LLISNIRSVDAGLYICVRANEAGSVKGEAYLSVLVR--------------------TQIIQ-- 595
              |:|.|.:..|.|.|.||..|..|..|  .|:.|..|                    |..|:  
  Fly   280 YSLIIRNFQPTDFGNYSCVADNALGRTK--KYIEVSGRPGPADFISPALSGFLDHYNLTWTIESI 342

  Fly   596 PPVDTTVLLGLTATLQCKVSSDPSVPYNIDWYREGQSSTPISNSQRIGVQADG----------QL 650
            ||:|...|| ....|..:....|.     .|:......|||        :.||          .|
  Fly   343 PPLDEIKLL-YRRLLMNETYQHPG-----KWHEYHIKPTPI--------RTDGSHFLMSYLVKNL 393

  Fly   651 EIQAVRASDVGSYACVVTSP---GGNE 674
            |..||       |..:|.:.   |.||
  Fly   394 EHNAV-------YEAIVQAKNKYGWNE 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sdkNP_001284756.1 Ig 71..157 CDD:299845
I-set 72..150 CDD:254352
Ig 172..245 CDD:299845
IG_like 280..356 CDD:214653 22/85 (26%)
Ig 280..343 CDD:299845 21/72 (29%)
IG_like 375..450 CDD:214653 19/74 (26%)
Ig 378..447 CDD:143165 18/68 (26%)
Ig 506..587 CDD:299845 25/83 (30%)
IG_like 506..587 CDD:214653 25/83 (30%)
I-set 592..682 CDD:254352 23/98 (23%)
Ig 595..682 CDD:299845 22/95 (23%)
FN3 686..789 CDD:238020
FN3 798..893 CDD:238020
FN3 901..1005 CDD:238020
fn3 1011..1094 CDD:278470
FN3 1108..1202 CDD:238020
FN3 1210..1308 CDD:238020
fn3 1317..1402 CDD:278470
FN3 1415..1507 CDD:238020
FN3 1513..1608 CDD:238020
fn3 1617..1708 CDD:278470
FN3 1722..1823 CDD:238020
FN3 1828..1920 CDD:238020
FN3 1927..2016 CDD:238020
CG7166NP_001262181.1 IG_like 50..133 CDD:214653 26/95 (27%)
Ig 56..116 CDD:143165 19/67 (28%)
IG_like 144..221 CDD:214653 23/98 (23%)
IGc2 151..209 CDD:197706 19/79 (24%)
IG_like 232..313 CDD:214653 25/83 (30%)
Ig 242..311 CDD:143165 21/71 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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