DRSC/TRiP Functional Genomics Resources

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Protein Alignment sdk and CG13506

DIOPT Version :9

Sequence 1:NP_001284756.1 Gene:sdk / 31017 FlyBaseID:FBgn0021764 Length:2265 Species:Drosophila melanogaster
Sequence 2:NP_001286718.1 Gene:CG13506 / 37556 FlyBaseID:FBgn0034723 Length:503 Species:Drosophila melanogaster


Alignment Length:531 Identity:114/531 - (21%)
Similarity:199/531 - (37%) Gaps:147/531 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   359 PPLF-FTPMRAETFGEFGGQVQLTCDVVG-EPTPQVKWFRNAESVDAHIE---SGRYTLNTDNTL 418
            ||.| .|.:|.|  .:.|..|.|.||... :.:..|.|::| ..:.|:.:   |.|.....:|::
  Fly    69 PPYFDVTDLRVE--AKPGDDVILNCDARNFQLSNAVVWYKN-RIIIANGQNPISQRVQCMLNNSI 130

  Fly   419 VIKKLILDDAAMFQCLAINEAGENSASTWLRVKTKTAKNRVKRLAQPRILRVRASHAGLGSEKGS 483
            :::.:..:|:..:.|..:.:          ||:..||            |||.|..:.|..::  
  Fly   131 LLRNVSPEDSDDYYCEILPQ----------RVRQHTA------------LRVGARLSILCDDR-- 171

  Fly   484 ESGSSDRRKEFRFASAPIMELPPQNVTALDGKDATISCRAVGSPNPNITWIYNETQLVDISSRVQ 548
              ..:||.:.||                 .|....:.||.....|..|.|.:|     |::.:..
  Fly   172 --DITDRSQTFR-----------------QGDHHKLECRTYLPDNATIKWSFN-----DLNGQPS 212

  Fly   549 IL--ESGDLLISNIRSVDAGLYICV-----RANEAGSVKGEAYLSVLVRTQIIQPPVDTTVLLGL 606
            .:  ::|.:::.|:...:||.|.|:     |....|:|..:...|.:|.|.  :..|:|.  .|.
  Fly   213 SVDNQNGVIILDNVDEKNAGDYQCLADDGSRHPPHGTVHIDVQYSPIVSTH--RHNVNTE--KGA 273

  Fly   607 TATLQCKVSSDPSVPYNIDWYREGQSSTPISN--SQRIGVQADGQ---LEIQAVRASDVGSYACV 666
            ||.|.|...:.   |....::.:...:..:|:  |.:..|..|..   |.::.|..||:|.|.|.
  Fly   274 TAELYCNYRAK---PIGRSYFIKDGKTLQLSDKYSLKDSVHNDHNRTTLIVREVTDSDLGEYLCQ 335

  Fly   667 VTSP-GGNETRAARLSVIELPFPPSNVKVERLPE-PQQRSINVSWTPGFDGNSPISKFIIQRREV 729
            |.:. |.||.:               |.|...|| ||...:.|      :||.....::::..::
  Fly   336 VENAIGSNEVK---------------VHVSYNPETPQFEDMTV------EGNKVTLHWLVRSHQL 379

  Fly   730 SELGPVPDPLLN--------WIT-----ELSNVSADQRWILLENLKAAT-VYQFRVSAVNRVGEG 780
                 :.:.:|:        |.|     ...:.:.|..|.:...|:.:. |:..||...|..| .
  Fly   380 -----LSEAMLDYQLTGSYTWSTVQVLETHRHNNTDNIWKITHQLELSRGVWHARVKTKNTKG-W 438

  Fly   781 SPSEPSNVVELPQEAPSG-------PPVGFV---------GSARSMSEIITQWQPPLEEHRNGQI 829
            |.....:|.|:|:::...       ||...|         |:|.||..:           ..|.|
  Fly   439 SHFSNDHVFEIPEDSEVDKDEEVELPPDEIVQAGIMPMSKGAASSMQRL-----------NVGVI 492

  Fly   830 L--GYILRYRL 838
            |  ..:||.||
  Fly   493 LLAALLLRVRL 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sdkNP_001284756.1 Ig 71..157 CDD:299845
I-set 72..150 CDD:254352
Ig 172..245 CDD:299845
IG_like 280..356 CDD:214653
Ig 280..343 CDD:299845
IG_like 375..450 CDD:214653 14/78 (18%)
Ig 378..447 CDD:143165 13/72 (18%)
Ig 506..587 CDD:299845 17/87 (20%)
IG_like 506..587 CDD:214653 17/87 (20%)
I-set 592..682 CDD:254352 23/95 (24%)
Ig 595..682 CDD:299845 23/92 (25%)
FN3 686..789 CDD:238020 21/117 (18%)
FN3 798..893 CDD:238020 14/59 (24%)
FN3 901..1005 CDD:238020
fn3 1011..1094 CDD:278470
FN3 1108..1202 CDD:238020
FN3 1210..1308 CDD:238020
fn3 1317..1402 CDD:278470
FN3 1415..1507 CDD:238020
FN3 1513..1608 CDD:238020
fn3 1617..1708 CDD:278470
FN3 1722..1823 CDD:238020
FN3 1828..1920 CDD:238020
FN3 1927..2016 CDD:238020
CG13506NP_001286718.1 IG_like 79..146 CDD:214653 14/69 (20%)
IGc2 83..146 CDD:197706 13/63 (21%)
IG_like 176..254 CDD:214653 20/99 (20%)
Ig 176..239 CDD:299845 17/84 (20%)
I-set 258..349 CDD:254352 26/112 (23%)
Ig 275..348 CDD:143165 19/90 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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