DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sdk and PTPRQ

DIOPT Version :9

Sequence 1:NP_001284756.1 Gene:sdk / 31017 FlyBaseID:FBgn0021764 Length:2265 Species:Drosophila melanogaster
Sequence 2:XP_016874762.1 Gene:PTPRQ / 374462 HGNCID:9679 Length:2536 Species:Homo sapiens


Alignment Length:2009 Identity:439/2009 - (21%)
Similarity:734/2009 - (36%) Gaps:533/2009 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   605 GLTATLQCKVSSDPSVP------------YNIDWYREGQSSTPISNSQRIGV------------- 644
            |.:.::..||...|..|            :::.|      |.|..:.:|..|             
Human   175 GYSVSVMKKVPIKPEQPEKLRAFNISTHSFSLHW------SLPSGHVERYQVDLVPDSGFVTIRD 233

  Fly   645 ------QADGQLEIQAVRAS-DVGSYACVVTSPGGNETRAARLSVIELPFPPSNVKVERLPEPQQ 702
                  |.|....:...|.. .:.|.:...|||   .||....:|.: |.||..:..||:   ..
Human   234 LGGGEYQVDVSNVVPGTRYDITISSISTTYTSP---VTRIVTTNVTK-PGPPVFLAGERV---GS 291

  Fly   703 RSINVSWTPGFDGNSPISKFIIQRREVSELGPVPDPLLNWITELSNVSADQRWILLENLKAATVY 767
            ..|.:||....:.|..|..:|::.:||.       |.:..:........|...:||.||...|.|
Human   292 AGILLSWNTPPNPNGRIISYIVKYKEVC-------PWMQTVYTQVRSKPDSLEVLLTNLNPGTTY 349

  Fly   768 QFRVSAVNRVGEG----------SPSEPSNVVELPQEA---------------PSGPPVGF---V 804
            :.:|:|.|..|.|          :.|.|..||.|..||               |:|....|   |
Human   350 EIKVAAENSAGIGVFSDPFLFQTAESAPGKVVNLTVEAYNASAVKLIWYLPRQPNGKITSFKISV 414

  Fly   805 GSARS----------MSEIITQWQPPLEEHRNGQI---------LGYILRYRLFGYNNVPWSYQN 850
            ..|||          :.:|:|...|...|:....:         ||     |:...:....|...
Human   415 KHARSGIVVKDVSIRVEDILTGKLPECNENSESFLWSTASPSPTLG-----RVTPPSRTTHSSST 474

  Fly   851 IT-NEAQR------NFLIQELITWKDYIVQI-AAYNNMGVGVYTEGSKIKTKEGVPEAPPTNVKV 907
            :| ||...      :|::..|..:..|:.:: ||....|   |.:.:.::|.|.|||.||.|...
Human   475 LTQNEISSVWKEPISFVVTHLRPYTTYLFEVSAATTEAG---YIDSTIVRTPESVPEGPPQNCVT 536

  Fly   908 EAINSTAARCRWTPPNPQQINGINQGYKIQAW--QRRLIDGEWRDIERRMKTVPPSLIDPLAEQT 970
            ..|...:....|.||.  .:.| ...|:::.:  ..|::|...:|::.....:.|          
Human   537 GNITGKSFSILWDPPT--IVTG-KFSYRVELYGPSGRILDNSTKDLKFAFTNLTP---------- 588

  Fly   971 AILGGLEKFTEYNISVLCFTDPGDGVASSQVAVMTMDDVPDEVTGLHFDDVSDRSVKVLWAPPRA 1035
                    ||.|::.:...|..|.| ..|.::|.|..|||..|..|...:|....|::.|..||.
Human   589 --------FTMYDVYIAAETSAGTG-PKSNISVFTPPDVPGAVFDLQLAEVESTQVRITWKKPRQ 644

  Fly  1036 SNGILTGYTVRYQVKD------------------------------------------------- 1051
            .|||:..|.|:..|.:                                                 
Human   645 PNGIINQYRVKVLVPETGIILENTLLTGNNEYINDPMAPEIVNIVEPMVGLYEGSAEMSSDLHSL 709

  Fly  1052 -------RPDTLKSF----------------------NLTADDTELTVNQLQATTHYWFEIVAWT 1087
                   .||  |:|                      ::.|:.....:.:|...|.:...:.|:|
Human   710 ATFIYNSHPD--KNFPARNRAEDQTSPVVTTRNQYITDIAAEQLSYVIRRLVPFTEHMISVSAFT 772

  Fly  1088 RVGSGIPKTATIQSGVEPVLPHAPTALALSNIEAFSVVLQFTPGFDGNSSITKWKVEGQTARNMT 1152
            .:|.|.|...::::..:  :|.:...:...||.:.|::|.:.|....|..||.:.:.........
Human   773 IMGEGPPTVLSVRTRQQ--VPSSIKIINYKNISSSSILLYWDPPEYPNGKITHYTIYAMELDTNR 835

  Fly  1153 WFTICEINDPDAETLTVTGLVPFTQYRLRLSASNVVGSSKPSEATKDF-QTIQARPKHPPFNVTV 1216
            .|.|..|::    :..:|||..:|:|::|::||..||.|..||....| :|.:..|:..|.:|.|
Human   836 AFQITTIDN----SFLITGLKKYTKYKMRVAASTHVGESSLSEENDIFVRTSEDEPESSPQDVEV 896

  Fly  1217 RAMSAQQLRVRWIPLQQTEWYGNPRGYNISYKQLVKTPGTIKYVPRSVVIEDHTANSHVLDSLEE 1281
            ..::|.::|::|.|.::      |.|..|:|:.|.|...|:       .:::.:....:|.:|..
Human   897 IDVTADEIRLKWSPPEK------PNGIIIAYEVLYKNIDTL-------YMKNTSTTDIILRNLRP 948

  Fly  1282 WTLYEVKMNACNDVGCSKESDTAVE-RTREAVPSYGPLDVQANATSSTTVVVQWGEVPRQHRNGQ 1345
            .|||.:.:.:....|...:..:.:. ||.|.||...|.::.....||..:.:.:  :|....||.
Human   949 HTLYNISVRSYTRFGHGNQVSSLLSVRTSETVPDSAPENITYKNISSGEIELSF--LPPSSPNGI 1011

  Fly  1346 IDGYKVFYAAADRGQQVLHKTIPNNATFTTTLTELKKYVVYHVQVLAYTRLGNGALSTPPIRVQT 1410
            |..|.::...::..::   :|| |..:.|..:..||||..|.::|.|.|..|.|..|. ||.:.|
Human  1012 IQKYTIYLKRSNGNEE---RTI-NTTSLTQNIKVLKKYTQYIIEVSASTLKGEGVRSA-PISILT 1071

  Fly  1411 FEDTP-GVPSNVSFPDVSLTMARIIWDVPVDPNGKILAYQVTYTLNGSAMLNYSREFPPSDRTFR 1474
            .||.| ..|.:.|...:|....::.|..|::|||.||.|.| |..|.|::    :....::.:..
Human  1072 EEDAPDSPPQDFSVKQLSGVTVKLSWQPPLEPNGIILYYTV-YVWNRSSL----KTINVTETSLE 1131

  Fly  1475 ATELLPGKYYSFSCTAQTRLGWGKIATALVYTTNNRERPQ-APSVP--QISRSQIQAHQITFSWT 1536
            .::|.....||...||.||.|.||..:.::    :.:.|: |||.|  .:..:.:.:..|...||
Human  1132 LSDLDYNVEYSAYVTASTRFGDGKTRSNII----SFQTPEGAPSDPPKDVYYANLSSSSIILFWT 1192

  Fly  1537 PGRDGFAPLRYYTVEMRENEGRWQ---PLPERVDPSLSSFTAVGLRPYMT----YQFRIQATNDL 1594
            |.......::||:|..|...|.:.   .|.| |.....:.|...:...:|    |.|.:.|:..:
Human  1193 PPSKPNGIIQYYSVYYRNTSGTFMQNFTLHE-VTNDFDNMTVSTIIDKLTIFSYYTFWLTASTSV 1256

  Fly  1595 GPSAFSRESVIVRTLPAAPAVGVGGLKVVPITTTSVRVQWSALETALWNGDASTGGYRILYQQLS 1659
            |....|.:.:.|.|....|...||.|....|::|::.|.|..        .|...|....|..| 
Human  1257 GNGNKSSDIIEVYTDQDIPEGFVGNLTYESISSTAINVSWVP--------PAQPNGLVFYYVSL- 1312

  Fly  1660 DFPTALQSTPKTDVH-----GINENSVVLSDLQQDRNYEIVVLPFNSQGPGPATPPAAVYV--GE 1717
                .||.||:   |     ...|.|:...:|::..:|.:.:.|...:|... |..|.:|:  .|
Human  1313 ----ILQQTPR---HVRPPLVTYERSIYFDNLEKYTDYILKITPSTEKGFSD-TYTAQLYIKTEE 1369

  Fly  1718 AVPTGEPRAVDAAPISSTEVRLLWKPPKQSMQNGDILGYKI--------YYLVT----------- 1763
            .||...|.......:|||.|.|.|.||.:  .||.|:.|.:        |..:|           
Human  1370 DVPETSPIINTFKNLSSTSVLLSWDPPVK--PNGAIISYDLTLQGPNENYSFITSDNYIILEELS 1432

  Fly  1764 ----------------------------------------------------YSPQALEPG---- 1772
                                                                :||..|..|    
Human  1433 PFTLYSFFAAARTRKGLGPSSILFFYTDESVPLAPPQNLTLINCTSDFVWLKWSPSPLPGGIVKV 1497

  Fly  1773 ---RKWEEEIEV-----VSATATSHSLVFLDKFTEYRIQLLAFNPAGDGPR-SAPITVKTLPGVP 1828
               :..|.|.:.     :|...|...||.|:..:.|.|::.||...|:|.: |..:...|...||
Human  1498 YSFKIHEHETDTIYYKNISGFKTEAKLVGLEPVSTYSIRVSAFTKVGNGNQFSNVVKFTTQESVP 1562

  Fly  1829 SAPLHLRFSDITMQSLEVTWDPPKFLNGEILGYLVTYETTEENEKFSKQ------VKQKVSNTTL 1887
            ....:::....:.||:.|.|||||..||.|..|:||.|  ..:.|.|.|      :| .::||  
Human  1563 DVVQNMQCMATSWQSVLVKWDPPKKANGIITQYMVTVE--RNSTKVSPQDHMYTFIK-LLANT-- 1622

  Fly  1888 RVQNLEEEVTYTFTVRAQTSVDYGPGISENVTTGPQDGSPVAPRDLILTKTLS-SVEMHWINGPS 1951
                     :|.|.|||.||...|...:.:|:|.|:. .|..|.::..:...| |..:.||...:
Human  1623 ---------SYVFKVRASTSAGEGDESTCHVSTLPET-VPSVPTNIAFSDVQSTSATLTWIRPDT 1677

  Fly  1952 GRGPILGYL--------IEAKK------RDDSRWTKIEQTRKGMMQDFTVSYHILMPSTAYTFRV 2002
                ||||.        :.|:|      .:...:.||:...:..:.:.||  :.|.....|.|:|
Human  1678 ----ILGYFQNYKITTQLRAQKCKEWESEECVEYQKIQYLYEAHLTEETV--YGLKKFRWYRFQV 1736

  Fly  2003 IAYNRYGISFPVYSKDS--ILT----------PSKLHLEYGYLQHKPFYRQTWFMVSLAATSIVI 2055
            .|....|     |...|  |.|          |..:|:    :...|      |.:|::.:...:
Human  1737 AASTNAG-----YGNASNWISTKTLPGPPDGPPENVHV----VATSP------FSISISWSEPAV 1786

  Fly  2056 IVMVIAVLC-VKS-KSYKYKQEAQKTLEESMAMSIDERQELALELYRSRHGVGTGTLNSVGTLRS 2118
            |......|. ||| .:.::.....|:.||:..:.|.:     ||:: :|:.|       |.|..:
Human  1787 ITGPTCYLIDVKSVDNDEFNISFIKSNEENKTIEIKD-----LEIF-TRYSV-------VITAFT 1838

  Fly  2119 GTLGTLGRKSTSRPPPGVHLGKSPPRPSPASVAYHSDEESLKCYDENPDDSSVTE------KPSE 2177
            |.:.....:..|.....|...:|.|:..|.::.          :.:.||:  ||:      .||:
Human  1839 GNISAAYVEGKSSAEMIVTTLESAPKDPPNNMT----------FQKIPDE--VTKFQLTFLPPSQ 1891

  Fly  2178 VSSS----EASQHSESE-------NESVRSDPHSFV---------NHYANVN------------- 2209
            .:.:    :|..:.|.:       |.|:....::||         .|..|::             
Human  1892 PNGNIQVYQALVYREDDPTAVQIHNLSIIQKTNTFVIAMLEGLKGGHTYNISVYAVNSAGAGPKV 1956

  Fly  2210 ------DSLRQSWKKTKPVRNYSSYTDSEPEGSAVMSLNGGQIIVNNMARSRAPLPGFS 2262
                  |....:..||||...|.:              .|..::.:.....|.|:..:|
Human  1957 PMRITMDIKAPARPKTKPTPIYDA--------------TGKLLVTSTTITIRMPICYYS 2001

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sdkNP_001284756.1 Ig 71..157 CDD:299845
I-set 72..150 CDD:254352
Ig 172..245 CDD:299845
IG_like 280..356 CDD:214653
Ig 280..343 CDD:299845
IG_like 375..450 CDD:214653
Ig 378..447 CDD:143165
Ig 506..587 CDD:299845
IG_like 506..587 CDD:214653
I-set 592..682 CDD:254352 19/108 (18%)
Ig 595..682 CDD:299845 19/108 (18%)
FN3 686..789 CDD:238020 28/112 (25%)
FN3 798..893 CDD:238020 24/124 (19%)
FN3 901..1005 CDD:238020 21/105 (20%)
fn3 1011..1094 CDD:278470 24/160 (15%)
FN3 1108..1202 CDD:238020 26/94 (28%)
FN3 1210..1308 CDD:238020 20/98 (20%)
fn3 1317..1402 CDD:278470 22/84 (26%)
FN3 1415..1507 CDD:238020 26/92 (28%)
FN3 1513..1608 CDD:238020 25/104 (24%)
fn3 1617..1708 CDD:278470 22/95 (23%)
FN3 1722..1823 CDD:238020 33/184 (18%)
FN3 1828..1920 CDD:238020 31/97 (32%)
FN3 1927..2016 CDD:238020 22/103 (21%)
PTPRQXP_016874762.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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