DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sdk and IL6ST

DIOPT Version :9

Sequence 1:NP_001284756.1 Gene:sdk / 31017 FlyBaseID:FBgn0021764 Length:2265 Species:Drosophila melanogaster
Sequence 2:NP_002175.2 Gene:IL6ST / 3572 HGNCID:6021 Length:918 Species:Homo sapiens


Alignment Length:988 Identity:192/988 - (19%)
Similarity:333/988 - (33%) Gaps:303/988 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   800 PVGFVGSARSMSEIITQWQPPLEEHRNGQILGYILRYRLFGY-----NNVPWSYQNITNEAQRNF 859
            |.|:          |:...|.::.|.|...: .:|:.:...|     |.:.|...:.|...::..
Human    27 PCGY----------ISPESPVVQLHSNFTAV-CVLKEKCMDYFHVNANYIVWKTNHFTIPKEQYT 80

  Fly   860 LIQEL---ITWKDYIVQIAAYN-NMGVGVYTEGS------KIKTKEGVPEAPPTNVKVEAINSTA 914
            :|...   :|:.|    ||:.| .:...:.|.|.      .|....|:|...|.|:.........
Human    81 IINRTASSVTFTD----IASLNIQLTCNILTFGQLE
QNVYGITIISGLPPEKPKNLSCIVNEGKK 141

  Fly   915 ARCRWTPPNPQQINGINQGYKIQAWQRRLIDGEW-----RDIERRMKTVPPSLIDPLAEQTAILG 974
            .||.|           :.|.:........:..||     .|.:.:..|.....:|   ..|....
Human   142 MRCEW-----------DGGRETHLETNFTLKSEWATHKFADCKAKRDTPTSCTVD---YSTVYFV 192

  Fly   975 GLEKFTEYNISVLCFTDPGDGVASSQVAVMTMDDV------------PDEVTGLHFDDVSDRSVK 1027
            .:|.:.|               |.:.:..:|.|.:            |..::.::.:::|. .:|
Human   193 NIEVWVE---------------AENALGKVTSDHINFD
PVYKVKPNPPHNLSVINSEELSS-ILK 241

  Fly  1028 VLWAPPRASNGILTGYTVRYQVKDRPDTLKSFNLTADDT-----ELTVNQLQATTHYWFEIVA-- 1085
            :.|..|...:.|:..|.::|:.||.....:   :..:||     ..||..|:..|.|.|.|..  
Human   242 LTWTNPSIKSVIILKYNIQYRTKDASTWSQ---IPPEDTASTRSSFTVQDLKPFTEYVFRIRCMK 303

  Fly  1086 ---------WTRVGSGI------PKTATIQSGVEPVLPHAPTALALSNIEAF---SVVLQFTPGF 1132
                     |:...|||      .|..:....::|           |:.:.:   .:|.:..|.|
Human   304 EDGKGYWSDWSEEASGIT
YEDRPSKAPSFWYKIDP-----------SHTQGYRTVQLVWKTLPPF 357

  Fly  1133 DGNSSI-------TKWK--VEGQTARNMTWFTICEINDPDAETLTVTGLVPFTQYRLRLSASNVV 1188
            :.|..|       |:||  ::..|. |.|..|:...||....||||               .|:|
Human   358 EANGKILDYEVTLTRWKSHLQNYTV-NATKLTVNLTNDRYLATLTV---------------RNLV 406

  Fly  1189 GSSKPS---------EATKDFQTIQARPKHPPFNVTVRAMSAQQLRVRWIPLQQTEWYGNPRGYN 1244
            |.|..:         :||.....::|.||.               .:.|:     || ..||   
Human   407 GKSDAAVLTIPACDFQATHPVMDLKAFPKD---------------NMLWV-----EW-TTPR--- 447

  Fly  1245 ISYKQLVKTPGTIKYVPRSVVI------------EDHTAN-SHVLDSLEEWTLYEVKMN-ACNDV 1295
                :.||     ||:....|:            ||.|.: :::..:|.|...|.:.:. ...|.
Human   448 ----ESVK-----KYILEWCVLSDKAPCITDWQQEDGTVHRTYLRGNLAESKCYLITVTPVYADG 503

  Fly  1296 GCSKESDTAVERTREAVPSYGPLDVQANATSSTTVVVQWGEVPRQHRNGQIDGYKVFYAAADRGQ 1360
            ..|.||..|.  .::|.||.|| .|:.........|::|.::|...:||.|..|.:||       
Human   504 PGSPESIKAY--LKQAPPSKGP-TVRTKKVGKNEAVLEWDQLPVDVQNGFIRNYTIFY------- 558

  Fly  1361 QVLHKTIPNNATFTT--------TLTELKKYVVYHVQVLAYTRLGNGALSTPPIRVQTFEDTPG- 1416
                :||..|.|...        ||:.|....:|.|::.|||  ..|....|.....|.:...| 
Human   559 ----RTIIGNETAVNVDSSHTEYTLSSLTSDTLYMVRMAAYT--DEGGKDGPEFTFTTPKFAQGE 617

  Fly  1417 -----VPSNVSFPDVSL-----------TMARIIWDVPVDPNGKILAYQVTYT-----LNGSAML 1460
                 ||..::|...:|           .:.:.||....||:...:|....:|     .|....:
Human   618 IEAIVVPVCLAFLLTTLLGVLFCFNKRDLIKKHIWPNVPDPSKSHIAQWSPHTPPRHNFNSKDQM 682

  Fly  1461 ----------------NYSREFPPSDRT---FRATELLPGKYYS----FSCTAQTRLGWG----- 1497
                            |..:.||...::   |:..::....:.|    .||.:.:|....     
Human   683 YSDGNFTDVSVVEIEANDKKPFPEDLKSLDLFKKEKINTEGHSSGIGGSSCMSSSRPSISSSDEN 747

  Fly  1498 ----KIATALVYTT--NNRERPQAPSVPQISRSQIQAHQITFSWTP----------GRDGFAPLR 1546
                ..::.:.|:|  ::..|.|.|||...|||:.....:.....|          |.||..|.:
Human   748 ESSQNTSSTVQYSTVVHSGYRHQVPSVQVFSRSESTQPLLDSEERPEDLQLVDHVDGGDGILPRQ 812

  Fly  1547 YYTVEMRENEGRWQPLPERVDPSLSSF------TAVGLRPYMTYQFRIQATNDLGPSAFSRESVI 1605
            .|   .::|..:.:.     .|.:|.|      ::|....::  :.:.|.::.:..|..|.:..:
Human   813 QY---FKQNCSQHES-----SPDISHFERSKQVSSVNEEDFV--RLKQQISDHISQSCGSGQMKM 867

  Fly  1606 VRTLPAAPAVGVG 1618
            .:.:.||.|.|.|
Human   868 FQEVSAADAFGPG 880

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sdkNP_001284756.1 Ig 71..157 CDD:299845
I-set 72..150 CDD:254352
Ig 172..245 CDD:299845
IG_like 280..356 CDD:214653
Ig 280..343 CDD:299845
IG_like 375..450 CDD:214653
Ig 378..447 CDD:143165
Ig 506..587 CDD:299845
IG_like 506..587 CDD:214653
I-set 592..682 CDD:254352
Ig 595..682 CDD:299845
FN3 686..789 CDD:238020
FN3 798..893 CDD:238020 20/107 (19%)
FN3 901..1005 CDD:238020 15/108 (14%)
fn3 1011..1094 CDD:278470 22/104 (21%)
FN3 1108..1202 CDD:238020 25/114 (22%)
FN3 1210..1308 CDD:238020 21/111 (19%)
fn3 1317..1402 CDD:278470 24/92 (26%)
FN3 1415..1507 CDD:238020 21/145 (14%)
FN3 1513..1608 CDD:238020 21/110 (19%)
fn3 1617..1708 CDD:278470 1/2 (50%)
FN3 1722..1823 CDD:238020
FN3 1828..1920 CDD:238020
FN3 1927..2016 CDD:238020
IL6STNP_002175.2 Lep_receptor_Ig 26..112 CDD:283889 19/99 (19%)
FN3 121..215 CDD:304408 19/122 (16%)
FN3 222..321 CDD:238020 22/102 (22%)
WSXWS motif 310..314 0/3 (0%)
FN3 519..599 CDD:214495 26/93 (28%)
Box 1 motif 651..659 3/7 (43%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 660..681 3/20 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 722..758 4/35 (11%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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