DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sdk and CG33543

DIOPT Version :9

Sequence 1:NP_001284756.1 Gene:sdk / 31017 FlyBaseID:FBgn0021764 Length:2265 Species:Drosophila melanogaster
Sequence 2:NP_001014458.3 Gene:CG33543 / 3346207 FlyBaseID:FBgn0053543 Length:468 Species:Drosophila melanogaster


Alignment Length:637 Identity:123/637 - (19%)
Similarity:200/637 - (31%) Gaps:231/637 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   321 LALLQANSSHSGEY--TCQVRLRSGGYPAVSASARLQILEPPLFFTPMRA-------ETFGEFGG 376
            |.||..|::..|:.  |......:||.|......      |||...|...       |:|..|..
  Fly    12 LLLLSQNAAILGQLDSTSSGGSGTGGAPPDRPPT------PPLSLQPSTPSITHFVNESFIIFCQ 70

  Fly   377 QVQLTCDVVGEPTPQVKWFRNAESVDAHIESGRYTLNTDNT----LVIKKLILDDAAMFQCLA-- 435
            .||...|        .|| |:..........||..:....|    ||.:.:.|:|...:.|..  
  Fly    71 TVQKDID--------TKW-RDPRGQTRENTKGRVHIEKKTTGLLALVFEHIALEDRGNWTCEVNG 126

  Fly   436 -------INEAGENSASTWLRVKTKTAKNRVKRLAQPRILRVRASHAGLGSEKGSESGSSDRRKE 493
                   :|...|..||..|.|..|.:..:.:::...|                           
  Fly   127 NRNGNRNVNVEREFLASFELLVNQKISFGKTEQVQSVR--------------------------- 164

  Fly   494 FRFASAPIMELPPQNVTALDGKDATISCRAVGSPNPNITWIYNETQLVDISSRVQILESGDLLIS 558
                               :|:||.::|...|.|.|.::|:||...:..::|......|..|.|.
  Fly   165 -------------------EGRDAMVNCFVEGMPAPEVSWLYNGEYINTVNSTKHNRLSNGLYIR 210

  Fly   559 NIRSVDAGLYICVRANEAGSVKGEAYLSVLVRTQIIQP--------PVDTTVLLGLTATLQCKVS 615
            |:...|||.|.|.......:......:::|:|.| .:|        ||. ...:|....|.|...
  Fly   211 NVSQADAGEYTCRAMRITPTFSDSDQITILLRIQ-HKPHWFFNETLPVQ-YAYVGGAVNLSCDAM 273

  Fly   616 SDPSVPYNIDWYREGQSSTPISNSQRIGVQADG-QLEIQAVRASDVGSYACVVTSPGGNETRAAR 679
            .:|  |.:..|....:..  :..:.||.|...| .|::|...||..|.|.|.|.:|.|...|..:
  Fly   274 GEP--PPSFTWLHNNKGI--VGFNHRIFVADYGATLQLQMKNASQFGDYKCKVANPLGMLERVIK 334

  Fly   680 LSVIELPFPPSNVKVERLPEPQQRSINVSWTPGF--DGNSPISKFIIQRREVSELGPVPDPLLNW 742
            |.....|..|...::::|           :|.||  |..:|                        
  Fly   335 LRPGPKPLGPRRFQLKKL-----------YTNGFELDIQTP------------------------ 364

  Fly   743 ITELSNVSADQRWILLENLKAATVYQFRVSAVNRVGEGSPSEPSNVVELPQEAPSGPPVGFVGSA 807
              .:||||.:.:           :|.:||:.:      |.:|                       
  Fly   365 --RMSNVSDEMQ-----------IYGYRVAYM------SDTE----------------------- 387

  Fly   808 RSMSEIITQWQPPLEEHRNGQILGYILRYRLFGYNNVPWSY---QNITNEAQRNFLIQELITWKD 869
                                           |.::...|||   ::.:....::|:|..|.|...
  Fly   388 -------------------------------FKFSAGNWSYAKQRDFSFHGGKHFIIPHLETNTT 421

  Fly   870 YIVQIAAYNNMGVGVYTEGSKIKTKEGVPEAPPTNVKVEAINSTAARCRWTP 921
            |:::.|:.|..|:   ::.|.:|                 :.:|||.|.|:|
  Fly   422 YLMRAASRNLAGL---SDWSPVK-----------------VFTTAAGCSWSP 453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sdkNP_001284756.1 Ig 71..157 CDD:299845
I-set 72..150 CDD:254352
Ig 172..245 CDD:299845
IG_like 280..356 CDD:214653 9/36 (25%)
Ig 280..343 CDD:299845 6/23 (26%)
IG_like 375..450 CDD:214653 19/87 (22%)
Ig 378..447 CDD:143165 18/81 (22%)
Ig 506..587 CDD:299845 20/80 (25%)
IG_like 506..587 CDD:214653 20/80 (25%)
I-set 592..682 CDD:254352 26/98 (27%)
Ig 595..682 CDD:299845 25/95 (26%)
FN3 686..789 CDD:238020 17/104 (16%)
FN3 798..893 CDD:238020 13/97 (13%)
FN3 901..1005 CDD:238020 6/21 (29%)
fn3 1011..1094 CDD:278470
FN3 1108..1202 CDD:238020
FN3 1210..1308 CDD:238020
fn3 1317..1402 CDD:278470
FN3 1415..1507 CDD:238020
FN3 1513..1608 CDD:238020
fn3 1617..1708 CDD:278470
FN3 1722..1823 CDD:238020
FN3 1828..1920 CDD:238020
FN3 1927..2016 CDD:238020
CG33543NP_001014458.3 IGc2 165..224 CDD:197706 20/58 (34%)
IG_like 256..336 CDD:214653 23/84 (27%)
IGc2 263..327 CDD:197706 19/67 (28%)
FN3 341..445 CDD:238020 31/231 (13%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.