DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sdk and Sdk1

DIOPT Version :10

Sequence 1:NP_001284756.1 Gene:sdk / 31017 FlyBaseID:FBgn0021764 Length:2265 Species:Drosophila melanogaster
Sequence 2:XP_038945791.1 Gene:Sdk1 / 304297 RGDID:1560686 Length:2306 Species:Rattus norvegicus


Alignment Length:2250 Identity:809/2250 - (35%)
Similarity:1162/2250 - (51%) Gaps:196/2250 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 APRFTTHPSSSGSIVSEGSTKILQCHALGYPQPTYRWLKDGVPVGDFSSSQFYRFHSTRREDAGS 135
            ||.|.|.|... .|..||:..:|.|.|.|.....::|:::...:..:||...|...|.::.|||.
  Rat   198 APYFKTEPGLP-QIHLEGNRLVLTCLAEGSWPLEFKWIRNDSELTAYSSEYRYIIPSLQKLDAGF 261

  Fly   136 YQCIARNDAGSIFSEKSDVVVAYMGIFENTTEGRLTVISGHPAIFDMPPIESIPVPSVMWQSEDG 200
            |:|:.||..|::...||::.|||||.|.:..: |.||..||.|:.::.||.|.|.|.|.|..|..
  Rat   262 YRCVVRNRMGALLQRKSEIQVAYMGNFMDADQ-RKTVSQGHAALLNLLPITSCPRPQVTWFREGH 325

  Fly   201 PLNYDIKYAFTHANQLIILSADENDRKGYRAKAINTQLGKEESSAFVHLNVSGDPYIE--VAPEI 263
            .:....:.|.|..|||:||:...:|...|..:|:|.:.|:.::|.|:||:|:.|...:  :||.|
  Rat   326 KIIPSSRIAITLENQLVILATTASDAGAYYVQAVNERNGENKTSPFIHLSVARDTGTQEAMAPVI 390

  Fly   264 IVRPQDVKVKVGTGVVELQCIANARPLHELETLWLKDGLAVETAGVRHTLNDPWNRTLALLQANS 328
            :|.|.:..|..|:....|:|||||||:.||...|.::|:.: |:|: |:    :.|.|.::...|
  Rat   391 VVAPGNRSVVAGSSETTLECIANARPVEELSVHWKRNGVRL-TSGL-HS----YGRRLTIINPTS 449

  Fly   329 SHSGEYTCQVRLRSGGYPAVSASARLQILEPPLFFTPMRAETFGEFGGQVQLTCDVVGEPTPQVK 393
            :.:|.|.|:..||...:....|.|.|.|:|||.|.....:...||....|.:.|..:|.|.|.::
  Rat   450 ADTGMYVCEATLRGSAFEPARAKAFLSIIEPPYFTAEPESRILGEVEETVDIPCRAMGVPLPTLQ 514

  Fly   394 WFRNAESVDAHIESGRYTLNTDNTLVIKKLILDDAAMFQCLAINEAGENSASTWLRVKTKTAKNR 458
            |:::|..: :.:::.||.:.....|.|:||..:|:.:|||.|.||.||....|:|.|..      
  Rat   515 WYKDAVPL-SKLQNPRYRVLPSGGLHIQKLSPEDSGIFQCFANNEGGEIQTHTYLDVTN------ 572

  Fly   459 VKRLAQPRILRVRASHAGLGSEKGSESGSSDRRKEFRFASAPIMELPPQNVTALDGKDATISCRA 523
                                                   .||.....|.:.|..||..|.:.|..
  Rat   573 ---------------------------------------IAPAFTQRPVDTTVTDGMTAVLRCEV 598

  Fly   524 VGSPNPNITWIYNETQLVDISSRV---QILESGDLLISNIRSVDAGLYICVRANEAGSVKGEAYL 585
            .|:|.|.|||......|...|.|:   .:||||.|.|:.:...|||.|.|...|...||...|.|
  Rat   599 SGAPKPAITWKKGNHILASGSVRIPRFMLLESGGLRIAPVFIQDAGNYACYATNTEASVNASAML 663

  Fly   586 SVLVRTQIIQPPVDTTVLLGLTATLQCKVSSDPSVPYNIDWYREGQSSTPISNSQRIGVQADGQL 650
            :|..||.|:.||.|..|:.|.||||.|..:.||.......|.::....|| |:|.||.|:.||.|
  Rat   664 TVWNRTSIVHPPEDRVVIKGTTATLCCGATHDPRTSLRYVWKKDNAVITP-SSSSRIVVEKDGSL 727

  Fly   651 EIQAVRASDVGSYACVVTSPGGNETRAARLSVIELPFPPSNVKVERLPEPQQRSINVSWTPGFDG 715
            .|....:.|:|.|.|.:.|.|||::|.|||.|||||.||.|: :..|...:..|:.:||...|||
  Rat   728 VISQTWSGDIGDYTCEIVSEGGNDSRTARLEVIELPHPPQNL-LASLSSARSHSVTLSWVRPFDG 791

  Fly   716 NSPISKFIIQRREVSELGPVPDPLLNWITELSNVSADQRWILLENLKAATVYQFRVSAVNRVGEG 780
            |||:..:|:|   |||..   .|   |...||||..:...:.:..|..|..|||||.|||:||:|
  Rat   792 NSPVLYYIVQ---VSENN---SP---WKVHLSNVGPEMAGVTVSGLTPARTYQFRVCAVNQVGKG 847

  Fly   781 SPSEPSNVVELPQEAPSGPPVGFVGSARSMSEIITQWQPPLEEHRNGQILGYILRYRLFGYNNVP 845
            ..|..::.:.||:|.||.||...|.|.|:...|:.|||||.|...||.:.||||||||.|   :|
  Rat   848 QYSTETSRLMLPEEPPSAPPKNIVASGRTNQSIMVQWQPPPETEHNGVLRGYILRYRLAG---LP 909

  Fly   846 WSYQ--NITNEAQRNFLIQELITWKDYIVQIAAYNNMGVGVYTEGSKIKTKEGVPEAPPTNVKVE 908
            ..:|  ||::......|:.:||.|..|.:|:||||..|:||::......|.:|||.|||.||:.|
  Rat   910 GEHQQRNISSPEVNYCLVTDLIIWTQYEIQVAAYNGAGLGVFSRAVTEYTLQGVPTAPPQNVQAE 974

  Fly   909 AINSTAARCRWTPPNPQQINGINQGYKIQAWQRRLIDGEWRDIERRMKTVPPSLIDPLAEQT--A 971
            |:|||.....|.||..|.|||||||||:.||.   .|..        :||....|.|....|  .
  Rat   975 AVNSTTVHFLWNPPPQQFINGINQGYKLLAWP---ADAP--------ETVTAVTIAPDFHGTHHG 1028

  Fly   972 ILGGLEKFTEYNISVLCFTDPGDGVASSQVAVMTMDDVPDEVTGLHFDDVSDRSVKVLWAPPRAS 1036
            .:..|:|||.|..||||||.||||..|:...|.|.:|.|..|..|.|.::.|.|:||.|..|...
  Rat  1029 YITNLKKFTAYFTSVLCFTTPGDGPPSTPQLVWTHEDRPGAVGHLSFTEILDTSLKVSWQEPLER 1093

  Fly  1037 NGILTGYTVRYQVKDRPDTLKSFNLTADDTELTVNQLQATTHYWFEIVAWTRVGSGIPKTATIQS 1101
            |||:|||.:.::|..|.|:..:..|.:...|..:..|.:.|.|..::.|.|..|.|:..::||.|
  Rat  1094 NGIITGYQISWEVYGRNDSRLTHTLNSTTHEYKIQGLSSLTTYTIDVAAMTTAGVGLTTSSTISS 1158

  Fly  1102 GVEPVLPHAPTALALSNIEAFSVVLQFTPGFDGNSSITKWKVEGQTAR---NMTWFTIC-EINDP 1162
            ||.|.||.||:.|.:|||...|..|||.||:||.::|.:|.||||...   ...|.|:. |.|:|
  Rat  1159 GVPPDLPGAPSNLVISNISPRSATLQFRPGYDGKTAICRWIVEGQVGAIGDEEEWVTLYEEENEP 1223

  Fly  1163 DAETLTVTGLVPFTQYRLRLSASNVVGSSKPSEATKDFQTIQARPKHPPFNVTVRAMSAQQLRVR 1227
            ||:.|.:..|.|:|.||.|:...|:||.|..|::::..||:||.|...|.::|||..|...||:|
  Rat  1224 DAQMLEIPNLTPYTHYRFRMKQVNIVGPSPFSQSSRVIQTLQAPPDVAPTSLTVRTASETSLRLR 1288

  Fly  1228 WIPLQQTEWYGNPR--GYNISYKQLVKTPGTIKYVPRSVVIEDHTANSHVLDSLEEWTLYEVKMN 1290
            |:||..:::.|||.  ||.:.|.:..:....:     :.|:.|.......::.|||||.||::|.
  Rat  1289 WVPLPDSQYNGNPESVGYRVKYWRSDQPSSAL-----AQVVNDRLERELTIEELEEWTEYELRMQ 1348

  Fly  1291 ACNDVGCSKESDTAVERTREAVPSYGPLDVQANATSSTTVVVQWGEVPRQHRNGQIDGYKVFYAA 1355
            |.|.:|....|:....||||:|||..|.:|.|.|.|||.:::.|..||.|.:||.|.||||.|.|
  Rat  1349 AFNAIGAGPWSELVRGRTRESVPSASPENVSAEAVSSTQILLTWASVPEQDQNGLILGYKVLYRA 1413

  Fly  1356 ADRGQQVLHKTIPNNATFTTTLTELKKYVVYHVQVLAYTRLGNGALSTPPIRVQTFEDTPGVPSN 1420
            .|...:.....:..|.|.:..|..|:|:|||.:||||:||:|||..|:|.|..:|.:||||.|..
  Rat  1414 KDLDPEPRSHVVRGNHTQSALLAGLRKFVVYELQVLAFTRIGNGVPSSPLILERTKDDTPGPPVR 1478

  Fly  1421 VSFPDVSLTMARIIWDVPVDPNGKILAYQVTYTL-NGSAMLNYSREFPPSDRTFRATELLPGKYY 1484
            :.||:|.||..||:|..|.:|||.||.||:.|.| :||.....:.|...:.|.|.||||.|...|
  Rat  1479 LVFPEVRLTAVRIVWQPPEEPNGVILGYQIAYRLASGSPHTFTTVEVGATVRQFTATELAPESAY 1543

  Fly  1485 SFSCTAQTRLGWGKIATALVYTTNNRERPQAPSVPQISRSQIQAHQITFSWTPGRDGFAPLRYYT 1549
            .|..:|:||.|||:...|.|.||..||||..|....:.::::.|..:...|.||.||.:|:||:|
  Rat  1544 IFRLSAKTRQGWGEPLEATVITTEKRERPAPPRELLVPQAEVTARSLRLQWVPGSDGASPIRYFT 1608

  Fly  1550 VEMRE-NEGRWQPLPERVDPSLSSFTAVGLRPYMTYQFRIQATNDLGPSAFSRESVIVRTLPAAP 1613
            |::|| ..|.||.....:....:......|||:.:|:.|::||||:|.|.||.|:..|.||...|
  Rat  1609 VQVRELPGGEWQTYSSSISHEATLCAVERLRPFTSYKLRLKATNDIGDSDFSAETEAVTTLQDVP 1673

  Fly  1614 AVGVGGLKVVPITTTSVRVQWSALETALWNGDASTGGYRILYQQLSD------------FPTALQ 1666
            ....|.:...|.||:||.:||........||  ...||||.|::|..            .|:||:
  Rat  1674 GEPPGSVSATPHTTSSVLIQWQPPRDESLNG--LLQGYRIYYRELESETGLSPEPKTLKSPSALR 1736

  Fly  1667 S--TPKTDVHGINENSVV----LSDLQQDRNYEIVVLPFNSQGPGPATPPAAVYVGEAVPTGEPR 1725
            :  |.::....:|.:|.:    |:.|::.|.||:::..:|..|..||:.|..|:||||.|...|:
  Rat  1737 AELTAQSSFKTVNSSSTLTTYELTHLKKYRRYEVIMTAYNIIGESPASVPVEVFVGEAAPAMAPQ 1801

  Fly  1726 AVDAAPISSTEVRLLWKPPKQSMQNGDILGYKIYYLVTYSPQALEPGRKWE-------EEIEVVS 1783
            .:...|::::::.:.|.||....|||:|.|||:||              ||       |:::|:.
  Rat  1802 NIQVTPLTASQLEVTWDPPPPESQNGNIQGYKVYY--------------WEADSRNETEKMKVLF 1852

  Fly  1784 ATATSHSLVFLDKFTEYRIQLLAFNPAGDGPRSAPITVKTLPGVPSAPLHLRFSDITMQSLEVTW 1848
            .......:..|...|:|.:.:.|||.|||||||.|...:|....|..|..|.||:||..:|.|:|
  Rat  1853 LPEPVVKIKDLTSHTKYLVSISAFNAAGDGPRSDPCQGRTHQAAPGPPSFLEFSEITSTTLNVSW 1917

  Fly  1849 DPPKFLNGEILGYLVTYETTEENEKFSKQVKQKVSNT---TLRVQNLEEEVTYTFTVRAQTSVDY 1910
            ..|...||.:.||.|.||.....:..||.|...|...   .|:|::|.:.|||.|.|:|:| :.|
  Rat  1918 GEPSAANGILQGYRVVYEPLAPVQGVSKVVTVDVKGNWQRWLKVRDLTKGVTYFFRVQART-IAY 1981

  Fly  1911 GPGISENVTTGPQDGSPVAPRDLILTKTLSSVEMHWINGPSGRGPILGYLIEAKKRDDSRWTKIE 1975
            ||.:..|||.||.:|||.:||::::||:.|.:.:.|..|.:|..|..||:|||:..|:..|....
  Rat  1982 GPELQANVTAGPAEGSPGSPRNVLVTKSASELTLQWTEGNTGNTPTTGYVIEARPSDEGLWDMFA 2046

  Fly  1976 QTRKGMMQDFTVSYHILMPSTAYTFRVIAYNRYGISFPVYSKDSILTPSKLHLEYGYLQHKPFYR 2040
            :........:||....|.....|.|||:|.|:.|...|  |:.||...::        ...|||.
  Rat  2047 KDIPRSATSYTVGLDKLRQGVTYEFRVVAVNKAGFGEP--SRPSIAVSAQ--------AEAPFYE 2101

  Fly  2041 QTWFMVSLAATSIVIIVMVIAVLCVKSKSYKYKQ----EAQKTLEESMAMSIDERQELALELYRS 2101
            :.||::.:|.:|::::::|:.||.:..:|.|||.    :....:||:  :::|.....|||| .|
  Rat  2102 EWWFLLVIALSSLLLVLLVVFVLVLHGQSKKYKNCGSGKGISNMEET--VTLDNGGFAALEL-NS 2163

  Fly  2102 RHGVGTGTLNSVGTLRSGTLGTLGRKSTSRPPPGVHLGKSPPRPSPASVAYHSDEESLKCYDENP 2166
            ||                    |..|||.....|.   :|||||||..:.| |||:....|:...
  Rat  2164 RH--------------------LNVKSTFSKKNGT---RSPPRPSPGGLHY-SDEDICNKYNGAV 2204

  Fly  2167 DDSSVTEKPSEVSSSEASQHSESENESVRSDPHSFVNHYANVNDSLRQSWKKTKPV---RNYSSY 2228
            ...||..|...|..|| |:.|:|:.|.. ...|||||||.: :.:...|||:..|.   ..|.:.
  Rat  2205 LTESVNLKEKSVDGSE-SEASDSDYEEA-LPKHSFVNHYMS-DPTYYNSWKRRPPAAAPHRYEAV 2266

  Fly  2229 TDSE--PE-GSAVMSLNGGQIIVNNMARSRAPLPGFSSFV 2265
            ..:|  |. .:.:.:.:.|.:.......:||||.||||||
  Rat  2267 AGAEAGPHLHTVITTQSAGGVYTPAGPGARAPLTGFSSFV 2306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sdkNP_001284756.1 Ig_3 72..142 CDD:464046 21/69 (30%)
Ig 280..344 CDD:409353 23/63 (37%)
Ig strand B 280..283 CDD:409353 1/2 (50%)
Ig strand C 292..298 CDD:409353 2/5 (40%)
Ig strand E 319..323 CDD:409353 2/3 (67%)
Ig strand F 333..338 CDD:409353 2/4 (50%)
Ig 360..451 CDD:472250 28/90 (31%)
Ig strand B 378..382 CDD:409353 1/3 (33%)
Ig strand C 391..395 CDD:409353 0/3 (0%)
Ig strand E 416..420 CDD:409353 1/3 (33%)
Ig strand F 430..435 CDD:409353 3/4 (75%)
Ig strand G 443..446 CDD:409353 0/2 (0%)
Ig 502..587 CDD:472250 31/87 (36%)
Ig strand B 517..521 CDD:409353 1/3 (33%)
Ig strand C 530..534 CDD:409353 2/3 (67%)
Ig strand E 554..557 CDD:409353 1/2 (50%)
Ig strand F 567..572 CDD:409353 2/4 (50%)
Ig strand G 580..583 CDD:409353 0/2 (0%)
Ig 592..682 CDD:472250 37/89 (42%)
Ig strand B 608..612 CDD:409353 3/3 (100%)
Ig strand C 623..627 CDD:409353 0/3 (0%)
Ig strand E 648..652 CDD:409353 2/3 (67%)
Ig strand F 662..667 CDD:409353 2/4 (50%)
Ig strand G 675..678 CDD:409353 1/2 (50%)
FN3 686..789 CDD:238020 39/102 (38%)
FN3 798..893 CDD:238020 40/96 (42%)
FN3 901..1005 CDD:238020 47/105 (45%)
FN3 <960..>1261 CDD:442628 119/308 (39%)
fn3 1317..1402 CDD:394996 38/84 (45%)
FN3 1415..1507 CDD:238020 41/92 (45%)
FN3 1513..1608 CDD:238020 33/95 (35%)
FN3 1583..>2011 CDD:442628 155/455 (34%)
Sdk1XP_038945791.1 PHA03307 <38..>162 CDD:223039
Ig_3 199..268 CDD:464046 21/69 (30%)
Ig 288..369 CDD:472250 27/81 (33%)
Ig strand B 303..307 CDD:409353 1/3 (33%)
Ig strand C 317..321 CDD:409353 1/3 (33%)
Ig strand E 340..343 CDD:409353 2/2 (100%)
Ig strand F 353..358 CDD:409353 1/4 (25%)
Ig_3 388..460 CDD:464046 27/77 (35%)
Ig 481..570 CDD:472250 28/89 (31%)
Ig strand B 499..503 CDD:409353 1/3 (33%)
Ig strand C 512..516 CDD:409353 0/3 (0%)
Ig strand E 536..540 CDD:409353 1/3 (33%)
Ig strand F 550..555 CDD:409353 3/4 (75%)
Ig strand G 563..566 CDD:409353 0/2 (0%)
I-set 575..665 CDD:400151 32/89 (36%)
Ig strand B 592..596 CDD:409353 1/3 (33%)
Ig strand C 605..609 CDD:409353 2/3 (67%)
Ig strand E 631..635 CDD:409353 2/3 (67%)
Ig strand F 645..650 CDD:409353 2/4 (50%)
Ig strand G 658..661 CDD:409353 0/2 (0%)
FN3 <667..1142 CDD:442628 205/499 (41%)
fn3 765..850 CDD:394996 37/94 (39%)
fn3 866..952 CDD:394996 40/88 (45%)
FN3 1165..1261 CDD:238020 40/95 (42%)
FN3 1271..1366 CDD:238020 31/99 (31%)
FN3 <1346..1684 CDD:442628 139/337 (41%)
FN3 1473..1566 CDD:238020 41/92 (45%)
FN3 <1614..2036 CDD:442628 149/438 (34%)
FN3 1998..2091 CDD:238020 31/94 (33%)
Blue background indicates that the domain is not in the aligned region.

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