DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sdk and Igsf9b

DIOPT Version :9

Sequence 1:NP_001284756.1 Gene:sdk / 31017 FlyBaseID:FBgn0021764 Length:2265 Species:Drosophila melanogaster
Sequence 2:XP_011240777.1 Gene:Igsf9b / 235086 MGIID:2685354 Length:1443 Species:Mus musculus


Alignment Length:1717 Identity:346/1717 - (20%)
Similarity:536/1717 - (31%) Gaps:677/1717 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   267 PQDVKVKVGTGVVELQC-----IANARPLHELETLWLKDGLAV---------------ETAGVRH 311
            |:.|..:.|.||| |:|     :....|.:.:|  |.|.|:.:               |.|| |.
Mouse    32 PEFVTARAGEGVV-LRCDVIHPVTGQPPPYVVE--WFKFGVPIPIFIKFGYYPPHVDPEYAG-RA 92

  Fly   312 TLNDPWNRTLALLQANSSHSGEYTCQVRLRSGGYPAV--SASARLQILEPPLFFTPMRAETFGEF 374
            :|:|  ..:|.|.|..|...|.|.|:|.:....|...  .:...|.|..||.|     .||..::
Mouse    93 SLHD--KASLRLEQVRSEDQGWYECKVLMLDQQYDTFHNGSWVHLTINAPPTF-----TETPPQY 150

  Fly   375 -----GGQVQLTCDVVGEPTPQVKWFRNAESVDAHIESGRYTLNTDNTLVIKKLILDDAAMFQCL 434
                 ||.:.:||...|.|.|.|.|.:....:.|   |.:|.: :|.:|.:..:..:|...:.|.
Mouse   151 IEAKEGGSITMTCTAFGNPKPIVTWLKEGTLLGA---SAKYQV-SDGSLTVTSVSREDRGAYTCR 211

  Fly   435 AINEAGENSASTWLRVKTKTAKNRVKRLAQPRILRVRASHAGLGSEKGSESGSSDRRKEFRFASA 499
            |.:..||...:|.|.|:                                              ..
Mouse   212 AYSIQGEAVHTTHLLVQ----------------------------------------------GP 230

  Fly   500 PIMELPPQNVTALDGKDATISCRAVGSP-NPNITWIYNETQLV---DISSRVQILESGDLLISNI 560
            |.:..||:|:|....:||.::|||...| |...||.:.:..:.   |:..||:||..|.|:|..:
Mouse   231 PFIVSPPENITVNISQDALLTCRAEAYPGNLTYTWYWQDENVYFQNDLKLRVRILIDGTLIIFRV 295

  Fly   561 RSVDAGLYICVRANEAG-SVKGEAYLSVLVRTQIIQPPVDTTVLLGLTATLQCKVSSDP------ 618
            :..|||.|.||.:|..| |....|||:|....:::..|....|.:|:...::|.|.::|      
Mouse   296 KPEDAGKYTCVPSNSLGRSPSASAYLTVQYPARVLNMPPVIYVPVGIHGYIRCPVDAEPPATVVK 360

  Fly   619 --------------------------------------SVPYN---------------------- 623
                                                  .||||                      
Mouse   361 WNKDGRPLQVEKNLGWTLMEDGSIRIEEATEEALGTYTCVPYNTLGTMGQSAPARLVLKDPPYFT 425

  Fly   624 ----------------------------IDWYREGQSSTPISNSQRIGVQADGQLEIQAVRASDV 660
                                        |.|.:.|:.|....|:     ...|.|:.:|:...|.
Mouse   426 VLPGWEYRQEAGRELLIPCAAAGDPFPVITWRKVGKPSRSKHNA-----LPSGSLQFRALSKEDH 485

  Fly   661 GSYACVVTSPGGNETRAARLSVI-ELPFPPSNVKVERLPEPQQRSINVSWTPGFDGN-------- 716
            |.:.||.|:...:.|.:..|:|| ..|..|.:|:|    .....:.||||.||:||.        
Mouse   486 GEWECVATNVVTSITASTHLTVIGTSPHAPGSVRV----HVSMTTANVSWEPGYDGGYEQTFSVW 546

  Fly   717 -SPISKFIIQRREVSELGPVPDPLLNWITELSNVSADQRWILLENLKAATVYQFRVSAVNRVGEG 780
             .|:.|       .::.||     .:|::  .:|.....|:|:::|:..|.|||.|.|.||:|..
Mouse   547 YGPLMK-------RAQFGP-----HDWLS--LSVPPGPSWLLVDSLEPETAYQFSVLAQNRLGTS 597

  Fly   781 SPSE--PSNVVELPQEAPS-----GPPVGFVGSARSMSEIITQWQPPLEEHRNGQILGYILRYRL 838
            :.||  ..|.:..|...|.     .||.....: |:...::..|.||  .:.:..|..||:.:|:
Mouse   598 AFSEVVTVNTLAFPVTTPEPLVLVTPPRCLTAN-RTQQGVLLSWLPP--ANHSFPIDRYIMEFRV 659

  Fly   839 FGYNNVPWSYQNITNEA----QRNFLIQELI--TWKDYIVQIAAYNNMGVGVYTEGSKIK----- 892
                ...|   .:.::|    ..:|..::|.  ||.::.| :|...::    .:|.|.|.     
Mouse   660 ----GERW---EMLDDAIPGTDGDFFAKDLSQDTWYEFRV-LAVMQDL----ISEPSNIAGVSST 712

  Fly   893 --------TKEGVPEAPPTNVKVEA---------INSTAARCRWTPPNPQQINGINQGYKIQAWQ 940
                    |.:|:  |.|....:.|         :.||.|.|           .:|:       |
Mouse   713 DIFPQPDLTDDGL--ARPVLAGIVATICFLAAAILFSTLAAC-----------FVNK-------Q 757

  Fly   941 RRLIDGEWRDIERRMKTVPP--------SLIDPLAEQTAILGGLEKFTEYNISVLCFTDPGDGVA 997
            |:      |.::|  |..||        ||..||:                          .|..
Mouse   758 RK------RKLKR--KKDPPLSITHCRKSLESPLS--------------------------SGKV 788

  Fly   998 SSQVAVMTMDDVPDEVTGLHFDDVSDRSVKVLWAPPRASNGILTGYTVRYQVKDRPDTLKSFNLT 1062
            |.: ::.|: ..|.|.:    ||....:.|.:.:|.|.....|      |:...|..:.:.:::.
Mouse   789 SPE-SIRTL-RAPSESS----DDQGQPAAKRMLSPTREKELSL------YKKTKRAISSRKYSVA 841

  Fly  1063 ADDTELTVNQLQATTHYWFEIVAWTRVG------------------SGIPKTATI-------QSG 1102
            ..:.|     .:|||.  .|:::....|                  .|.|.....       ||.
Mouse   842 KAEAE-----AEATTP--IELISRGPDGRFVMGPSEMEPSVKGRRIEGFPFAEETDMYPEFRQSD 899

  Fly  1103 VEPVLPHAPTALALSNIEAFSVVLQFTPGFDGNSSITKWKVEGQTARNMTWFTICEINDPDAETL 1167
            .|...|..||::|       ::..|.||......|                              
Mouse   900 EENEDPLVPTSVA-------ALKPQLTPMSSSQDS------------------------------ 927

  Fly  1168 TVTGLVPFTQYRLRLSASNVVGSSKPSEATKDFQ-TIQARPKHPPFNVTVRAMSAQQLRVRWIPL 1231
                .:|...|..|.....:.|   ||......| |.||||..|.                  |.
Mouse   928 ----YLPPPAYSPRFQPRGLEG---PSGLGGRLQATGQARPPAPR------------------PF 967

  Fly  1232 QQTEWYGNPRGYNISYKQLVKTPGTIK----YVPRSVVIEDHTANSHVLDSLEEWTLYEVKMNAC 1292
            |..::|    ||..|     .:||.::    |:|                               
Mouse   968 QHGQYY----GYLSS-----SSPGEVEPPPFYMP------------------------------- 992

  Fly  1293 NDVGCSKESDTAVERTREAVPSYGPLDVQANATSSTTVVVQWGEVPRQHRNGQIDGYKVFYAAAD 1357
             :||                   .||   ::..||          |..|..|...          
Mouse   993 -EVG-------------------SPL---SSVMSS----------PPLHTEGPFG---------- 1014

  Fly  1358 RGQQVLHKTIP----NNATFTTTLTELKKYVVYHVQVLAYTRLGNGALSTPPIRVQTFEDTPGVP 1418
                  |.|||    .||:.:|               |..|:...|..|..|.         |.|
Mouse  1015 ------HPTIPEENGENASNST---------------LPLTQTPTGGRSPEPW---------GRP 1049

  Fly  1419 SNVSFPDVSLTMARIIWDVPVDPNGKILAYQVTYTLNGSAMLNYSREFPPSDRTFRATELLPGKY 1483
               .||...|....:::...:.|      ..|..:|...|.|  .|..||:.....|.       
Mouse  1050 ---EFPFGGLETPAMMFPHQLHP------CDVAESLQPKACL--PRGLPPAPLQVPAA------- 1096

  Fly  1484 YSFSCTAQTRLGW-----GKIATALVYTTNNRERPQAPSVPQISRSQIQAHQITFSWTPGRDGFA 1543
            |....:.:...||     |:........|..:|||..|.|   |:.|:: |      |....|..
Mouse  1097 YPGMLSLEAPKGWVGKSPGRGPIPAPPATKWQERPMQPLV---SQGQLR-H------TSQGMGIP 1151

  Fly  1544 PLRYYTVEMRENEG-----------RW---QPLP-------ERVDPSLSSFTAVGLRPYMTYQFR 1587
            .|.|  .|..|..|           ||   ||.|       .|.:|||..   |.|:|       
Mouse  1152 VLPY--PEPAEPGGHGGPSTFGLDTRWYEPQPRPRPSPRQARRAEPSLHQ---VVLQP------- 1204

  Fly  1588 IQATNDLGPSAFSRESVIVRTLPAAPAVGVGGLKVVPITTTSVRVQWSALETALWNGDASTGGYR 1652
                        ||.|.:.:: |.:...|      .|......|.:...|:.|            
Mouse  1205 ------------SRLSPLTQS-PLSSRTG------SPELAARARPRPGLLQQA------------ 1238

  Fly  1653 ILYQQLSDF----PTAL----QSTPKTDVHGINENSVVLSDLQQDRNYEIVVLPFNSQGPGPATP 1709
                ::|:.    |.|:    :|||.:.......:.......:....:..:...:.|..|||| |
Mouse  1239 ----EMSEITLQPPAAVSFSRKSTPSSTGSPSQSSRSGSPSYRPTMGFTTLATGYPSPPPGPA-P 1298

  Fly  1710 PAAVYVGEAV----PTGEPRAVDAAPI 1732
            ||.   |:.:    .|..||.:...|:
Mouse  1299 PAP---GDTLDVFGQTPSPRRMGEEPL 1322

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sdkNP_001284756.1 Ig 71..157 CDD:299845
I-set 72..150 CDD:254352
Ig 172..245 CDD:299845
IG_like 280..356 CDD:214653 23/97 (24%)
Ig 280..343 CDD:299845 21/82 (26%)
IG_like 375..450 CDD:214653 21/74 (28%)
Ig 378..447 CDD:143165 17/68 (25%)
Ig 506..587 CDD:299845 32/85 (38%)
IG_like 506..587 CDD:214653 32/85 (38%)
I-set 592..682 CDD:254352 25/183 (14%)
Ig 595..682 CDD:299845 25/180 (14%)
FN3 686..789 CDD:238020 33/113 (29%)
FN3 798..893 CDD:238020 21/113 (19%)
FN3 901..1005 CDD:238020 20/120 (17%)
fn3 1011..1094 CDD:278470 16/100 (16%)
FN3 1108..1202 CDD:238020 15/94 (16%)
FN3 1210..1308 CDD:238020 13/101 (13%)
fn3 1317..1402 CDD:278470 17/88 (19%)
FN3 1415..1507 CDD:238020 18/96 (19%)
FN3 1513..1608 CDD:238020 28/115 (24%)
fn3 1617..1708 CDD:278470 14/98 (14%)
FN3 1722..1823 CDD:238020 3/11 (27%)
FN3 1828..1920 CDD:238020
FN3 1927..2016 CDD:238020
Igsf9bXP_011240777.1 Ig 43..117 CDD:319273 22/79 (28%)
I-set 141..227 CDD:369462 25/94 (27%)
Ig 231..323 CDD:386229 34/91 (37%)
Ig <355..416 CDD:386229 4/60 (7%)
Ig 440..504 CDD:319273 14/68 (21%)
FN3 512..607 CDD:238020 32/112 (29%)
FN3 623..705 CDD:238020 19/96 (20%)
PHA03247 <900..1248 CDD:223021 109/597 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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