DRSC/TRiP Functional Genomics Resources

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Protein Alignment sdk and Papln

DIOPT Version :9

Sequence 1:NP_001284756.1 Gene:sdk / 31017 FlyBaseID:FBgn0021764 Length:2265 Species:Drosophila melanogaster
Sequence 2:NP_001192272.1 Gene:Papln / 170721 MGIID:2386139 Length:1302 Species:Mus musculus


Alignment Length:439 Identity:122/439 - (27%)
Similarity:163/439 - (37%) Gaps:61/439 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   316 PWNRTLALLQANSSHSGEYTCQVRLRSGG------YPAVSASARLQILEPPLFFTPMRAETFGEF 374
            ||.|..........|...|    ..|.||      .|.:...||..:  ||......|....|..
Mouse   874 PWRREQEPAPGEPPHIPAY----GNRPGGQEIRPRVPGLDREARPAV--PPTHSPSYRIRLAGSE 932

  Fly   375 --------GGQVQLTCDVVGEPTPQVKWFRNAESVDAHIESGRYTLNTDNTLVIKKLILDDAAMF 431
                    |..|||.|........|..|.:....    |.|.||.|..|.:|:|.:|..:||.::
Mouse   933 PSLVQAAPGQAVQLFCPGNIPSEFQAGWQKEGRP----ISSNRYQLQADGSLIISRLRPEDAGIY 993

  Fly   432 QCLAINEAGENSASTWLRV----KTKTAKNRVKRLAQPR--ILRVRASHAGLGSEKGSE---SGS 487
            .| ..:..|.......|||    .....:.:.:...:||  .|.....|.|.|:|.|..   |.|
Mouse   994 SC-GSHRPGHEPQEIQLRVTGGDMAVFPEGQPRHFPEPRNPDLGHGPPHRGTGAEAGGHRVLSPS 1057

  Fly   488 SDRRKEFRFASAPIMEL-----PPQNVTALDGKDATISCRAVGSPNPNITWIYNETQLVDISSRV 547
            ..|         |...|     .|..|.|..|:...::|||.|.|.|.|.| ..:.|||. |.|.
Mouse  1058 HPR---------PATRLRLDRTQPGVVDASPGQRIRLTCRAEGFPVPTIEW-QRDGQLVS-SPRH 1111

  Fly   548 QILESGDLLISNIRSVDAGLYICVRANEAGSVKGEAYLSVLVRTQIIQPPVDTTVLLGLTATLQC 612
            |:...|.|:||.:...|.|.|.||..|.....:....|.||....|...|...||..|.||.|.|
Mouse  1112 QVQPDGSLVISRVDVEDGGYYSCVAFNGQDRDQRWVQLRVLRELTITGLPPAVTVAEGDTARLLC 1176

  Fly   613 KVSSDPSVPYNIDWYREGQSSTPI-SNSQRIGVQADGQLEIQAVRASDVGSYACVVTSPGGNETR 676
            .|:.: ||  ||.|.|.|   .|| ::..|:....||.|.|..:|..|.|||.|.........:|
Mouse  1177 VVAGE-SV--NIRWSRNG---LPIQADGHRVHQSPDGTLLIHNLRPRDEGSYTCSAFRGSQAVSR 1235

  Fly   677 AARLSVIELPFPPS---NVKVERLPEPQQRSINVSWTPGFDGNSPISKF 722
            :..:.| .||.|.:   ::..:.:.:|:..:..:.......||...|.|
Mouse  1236 STEVKV-ALPAPAAQSRDLGKDCIDQPELANCALILQAQLCGNEYYSSF 1283

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sdkNP_001284756.1 Ig 71..157 CDD:299845
I-set 72..150 CDD:254352
Ig 172..245 CDD:299845
IG_like 280..356 CDD:214653 11/45 (24%)
Ig 280..343 CDD:299845 6/26 (23%)
IG_like 375..450 CDD:214653 21/74 (28%)
Ig 378..447 CDD:143165 19/68 (28%)
Ig 506..587 CDD:299845 29/80 (36%)
IG_like 506..587 CDD:214653 29/80 (36%)
I-set 592..682 CDD:254352 31/90 (34%)
Ig 595..682 CDD:299845 30/87 (34%)
FN3 686..789 CDD:238020 7/40 (18%)
FN3 798..893 CDD:238020
FN3 901..1005 CDD:238020
fn3 1011..1094 CDD:278470
FN3 1108..1202 CDD:238020
FN3 1210..1308 CDD:238020
fn3 1317..1402 CDD:278470
FN3 1415..1507 CDD:238020
FN3 1513..1608 CDD:238020
fn3 1617..1708 CDD:278470
FN3 1722..1823 CDD:238020
FN3 1828..1920 CDD:238020
FN3 1927..2016 CDD:238020
PaplnNP_001192272.1 TSP1 30..81 CDD:214559
ADAM_spacer1 184..299 CDD:368694
TSP1 309..362 CDD:214559
TSP1 389..447 CDD:214559
TSP1 447..504 CDD:214559
TSP1 511..562 CDD:214559
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 563..648
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 694..737
Kunitz_BPTI 771..822 CDD:333766
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 822..924 13/55 (24%)
Papilin_u7 831..922 CDD:374683 13/53 (25%)
Ig 932..>995 CDD:386229 18/66 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1024..1064 12/48 (25%)
I-set 1070..1141 CDD:369462 28/72 (39%)
Ig 1157..1241 CDD:386229 31/89 (35%)
PLAC 1257..1289 CDD:370061 5/27 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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