DRSC/TRiP Functional Genomics Resources

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Protein Alignment sdk and Il12rb2

DIOPT Version :9

Sequence 1:NP_001284756.1 Gene:sdk / 31017 FlyBaseID:FBgn0021764 Length:2265 Species:Drosophila melanogaster
Sequence 2:NP_032380.1 Gene:Il12rb2 / 16162 MGIID:1270861 Length:874 Species:Mus musculus


Alignment Length:1178 Identity:215/1178 - (18%)
Similarity:368/1178 - (31%) Gaps:462/1178 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   499 APIMELPPQNVTALDGKDATISCRAVGSPNPNITWIYNETQLVDISSRVQILE-SGDLLISNIR- 561
            ||::.|         |..|.|||..  :|....:...:..:|:       :|: ..|:|:.|:. 
Mouse    38 APVIPL---------GSAANISCSL--NPKQGCSHYPSSNELI-------LLKFVNDVLVENLHG 84

  Fly   562 ------------------SVDAGLYICVRANEAGSVKGEAYLSVLVRTQIIQPPVDTTVLLGLTA 608
                              |:...|::| :.|.:.|.|              :|||.       ..
Mouse    85 KKVHDHTGHSSTFQVTNLSLGMTLFVC-KLNCSNSQK--------------KPPVP-------VC 127

  Fly   609 TLQCKVSSDPSVPYNIDWYREGQSSTPISNSQRIGVQADGQLEIQAVRASDVGSYACVVTSPGGN 673
            .::..|...|..|.||...:||::                            |:.||...|  |.
Mouse   128 GVEISVGVAPEPPQNISCVQEGEN----------------------------GTVACSWNS--GK 162

  Fly   674 ETRAARLSVIELPFPPSNVKVERLPEPQQRSINVSWTPGFDGNSPISKFIIQRREVSELGPVPDP 738
            .|.......::|. .|:|:..::                       ..|...|:..:.|    |.
Mouse   163 VTYLKTNYTLQLS-GPNNLTCQK-----------------------QCFSDNRQNCNRL----DL 199

  Fly   739 LLNWITELSNVSADQRWILLENLKAATVYQFRVSAVNRVGEGSPSEPSN------VVELPQEAPS 797
            .:|    ||...|:.|:|:            ||:|:|.:|..| |.|..      |:.||   |.
Mouse   200 GIN----LSPDLAESRFIV------------RVTAINDLGNSS-SLPHTFTFLDIVIPLP---PW 244

  Fly   798 GPPVGFVGSARSMSEIITQWQPPLEEHRNGQILGYILRYRLFGYNNVPWSYQNITNEAQRNFLIQ 862
            ...:.|:.::.|...:  ||:.      .||::...|||:  ..|:..|:..|.|| |:..:.::
Mouse   245 DIRINFLNASGSRGTL--QWED------EGQVVLNQLRYQ--PLNSTSWNMVNATN-AKGKYDLR 298

  Fly   863 ELITWKDYIVQIAAYNNMGVGVYTEGSK-IKTKEGVPEAPPTNVKVEAINSTAARCRWTPPNPQQ 926
            :|..:.:|..||::..::..|.::..|: ::|:  .||..|..:                     
Mouse   299 DLRPFTEYEFQISSKLHLSGGSWSNWSESLRTR--TPEEEPVGI--------------------- 340

  Fly   927 INGINQGYKIQAWQRRLIDGEWRDIERRMKTVPPSLIDPLAEQTAILGGLEKFTEYNISVLCFTD 991
                     :..|..:      :||                                        
Mouse   341 ---------LDIWYMK------QDI---------------------------------------- 350

  Fly   992 PGDGVASSQVAVMTMDDVPDEVTGLHFDDVSDRSVKVLWA---PPRASNGILTGYTVRYQVKDRP 1053
                                        |...:.:.:.|.   |..|...||     .|||..:.
Mouse   351 ----------------------------DYDRQQISLFWKSLNPSEARGKIL-----HYQVTLQE 382

  Fly  1054 DTLKSFNLTADDTELTVNQLQATTHYWFEIVAWTRVGSGIPK----TATIQS------------- 1101
            .|.|:             .||.||.:    .:||||   ||:    ||::.:             
Mouse   383 VTKKT-------------TLQNTTRH----TSWTRV---IPRTGAWTASVSAANSKGASAPTHIN 427

  Fly  1102 -----GVEPVLPHAPTALALSNIEAFSVVLQFTPGFDGNSSITKWKVEGQTAR--NMT-----WF 1154
                 |...:.||..:|.: .|::  ::::.:.|....:|::.::.||.:..:  ::|     |.
Mouse   428 IVDLCGTGLLAPHQVSAKS-ENMD--NILVTWQPPKKADSAVREYIVEWRALQPGSITKFPPHWL 489

  Fly  1155 TICEINDPD-AETLTVTGLVPFTQYRLRLSA--------SNVVGSSKPSEATKDFQTIQARPKHP 1210
            .|    .|| ...|....:.|:..|.:|:.|        |::.|.||           ...|...
Mouse   490 RI----PPDNMSALISENIKPYICYEIRVHALSESQGGCSSIRGDSK-----------HKAPVSG 539

  Fly  1211 PFNVTVRAMSAQQLRVRWIPLQQTEWYGNPRGYNISYKQLVKTPG----TIKYVPRSVVIEDHTA 1271
            | ::|......::|.:.|..:...|..|....|.|.:|:...|..    .|:|        ..:.
Mouse   540 P-HITAITEKKERLFISWTHIPFPEQRGCILHYRIYWKERDSTAQPELCEIQY--------RRSQ 595

  Fly  1272 NSHVLDSLEEWTLYEVKMNACNDVGCSKESDTAVERTREAVPSYGPLDVQANATSSTTV-VVQWG 1335
            |||.:.||:....|.:.|.|....|.|.:.:     .||..|. |..:.:|...||..: ::..|
Mouse   596 NSHPISSLQPRVTYVLWMTAVTAAGESPQGN-----EREFCPQ-GKANWKAFVISSICIAIITVG 654

  Fly  1336 EVP-RQHRNGQIDGYKVFYAAADRGQQVLHKTIPNNATFTTTLTELKKYVVYHVQVLAYTRLGNG 1399
            ... |..|.      |.|...:....|...:|||:.|..|.    :|||                
Mouse   655 TFSIRYFRQ------KAFTLLSTLKPQWYSRTIPDPANSTW----VKKY---------------- 693

  Fly  1400 ALSTPPIRVQTFEDTPGVPSNVSFPDVSLTMARIIWDVPVDPNGKILAYQVTYTL---------- 1454
                           |.:...:..|..:|.||   |..|.:|. .::.::|.|.:          
Mouse   694 ---------------PILEEKIQLPTDNLLMA---WPTPEEPE-PLIIHEVLYHMIPVVRQPYYF 739

  Fly  1455 -NGSAMLNYSREFPPSDRTFRATELLPGKYYSFSCTAQTRLGWGKIATALVYTTNNRERPQAPSV 1518
             .|.....||..  ..|..:.|.....|     :.||:||      ....:|.......|.:...
Mouse   740 KRGQGFQGYSTS--KQDAMYIANPQATG-----TLTAETR------QLVNLYKVLESRDPDSKLA 791

  Fly  1519 PQISRSQIQAHQITFSWTPGRDGFAPLRYYTVEMRENEGRWQPLPERVDP-----------SLSS 1572
            ...|...:    ...::.|..:|:.|.....:.           |...||           |||.
Mouse   792 NLTSPLTV----TPVNYLPSHEGYLPSNIEDLS-----------PHEADPTDSFDLEHQHISLSI 841

  Fly  1573 FTAVGLRP 1580
            |.:..|||
Mouse   842 FASSSLRP 849

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sdkNP_001284756.1 Ig 71..157 CDD:299845
I-set 72..150 CDD:254352
Ig 172..245 CDD:299845
IG_like 280..356 CDD:214653
Ig 280..343 CDD:299845
IG_like 375..450 CDD:214653
Ig 378..447 CDD:143165
Ig 506..587 CDD:299845 17/100 (17%)
IG_like 506..587 CDD:214653 17/100 (17%)
I-set 592..682 CDD:254352 16/89 (18%)
Ig 595..682 CDD:299845 16/86 (19%)
FN3 686..789 CDD:238020 20/108 (19%)
FN3 798..893 CDD:238020 21/95 (22%)
FN3 901..1005 CDD:238020 4/103 (4%)
fn3 1011..1094 CDD:278470 19/85 (22%)
FN3 1108..1202 CDD:238020 22/109 (20%)
FN3 1210..1308 CDD:238020 22/101 (22%)
fn3 1317..1402 CDD:278470 17/86 (20%)
FN3 1415..1507 CDD:238020 21/102 (21%)
FN3 1513..1608 CDD:238020 15/79 (19%)
fn3 1617..1708 CDD:278470
FN3 1722..1823 CDD:238020
FN3 1828..1920 CDD:238020
FN3 1927..2016 CDD:238020
Il12rb2NP_032380.1 Lep_receptor_Ig 28..120 CDD:368845 19/100 (19%)
FN3 240..332 CDD:238020 25/107 (23%)
WSXWS motif 321..325 0/3 (0%)
fn3 438..523 CDD:365830 18/91 (20%)
FN3 536..630 CDD:238020 24/107 (22%)
Box 1 motif 677..685 3/7 (43%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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