DRSC/TRiP Functional Genomics Resources

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Protein Alignment sdk and CSF3R

DIOPT Version :9

Sequence 1:NP_001284756.1 Gene:sdk / 31017 FlyBaseID:FBgn0021764 Length:2265 Species:Drosophila melanogaster
Sequence 2:NP_724781.1 Gene:CSF3R / 1441 HGNCID:2439 Length:863 Species:Homo sapiens


Alignment Length:945 Identity:191/945 - (20%)
Similarity:310/945 - (32%) Gaps:275/945 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly  1395 RLGNGALSTPPIRVQTFEDTPGVPS-----NVSFPDVSL----TMARIIWD--VPVDPNGKILAY 1448
            ||||.:|:...:.:...   ||...     :||.|.|.|    |.:.||..  ..:||..:||  
Human     3 RLGNCSLTWAALIILLL---PGSLEECGHISVSAPIVHLGDPITASCIIKQNCSHLDPEPQIL-- 62

  Fly  1449 QVTYTLNGSAMLNYSREFPPSDRTFRATELLPGKYYS---FSCTAQTRLGWGKIATALVYTTNNR 1510
               :.| |:.:....|:...||.|..:...||...::   .||.    |.||.....|.......
Human    63 ---WRL-GAELQPGGRQQRLSDGTQESIITLPHLNHTQAFLSCC----LNWGNSLQILDQVELRA 119

  Fly  1511 ERPQAPSVPQ--ISRSQIQAHQITFSWTPGRDGFAPLRYYTVEMRENEGRWQ----PLPERVDPS 1569
            ..|  |::|.  .....:....:...|.||.:...|.. :|::..::.|..|    .:.:.|...
Human   120 GYP--PAIPHNLSCLMNLTTSSLICQWEPGPETHLPTS-FTLKSFKSRGNCQTQGDSILDCVPKD 181

  Fly  1570 LSSFTAVGLRPYMTYQ---FRIQATNDLGPS-----------AFSRESVIVRTLPAAPAVGVGGL 1620
            ..|...:..:..:.||   ..:||.|.||.|           ....|..::||:..:|       
Human   182 GQSHCCIPRKHLLLYQNMGIWVQAENALGTSMSPQLCLDPMDVVKLEPPMLRTMDPSP------- 239

  Fly  1621 KVVPITTTSVRVQWSALETAL------------WNGDASTGGYRILYQQLSDFPTALQSTPKTDV 1673
            :..|.....:::.|...:..|            ..|:||       :..:...|           
Human   240 EAAPPQAGCLQLCWEPWQPGLHINQKCELRHKPQRGEAS-------WALVGPLP----------- 286

  Fly  1674 HGINENSVVLSDLQQDRNYEIVVLPFNSQGPGPATP----------PAAVYVGEAVPTGEPRAVD 1728
                     |..||    ||:.       |..|||.          |...:..:..|:.|.|..:
Human   287 ---------LEALQ----YELC-------GLLPATAYTLQIRCIRWPLPGHWSDWSPSLELRTTE 331

  Fly  1729 AAP------------ISSTEVRLLWKPPKQSMQNGDILGYKIYYLVTYSPQALEPGRKWEEEIEV 1781
            .||            :....|:|.|||......:|.|.||.:.:..:....|:.|          
Human   332 RAPTVRLDTWWRQRQLDPRTVQLFWKPVPLEEDSGRIQGYVVSWRPSGQAGAILP---------- 386

  Fly  1782 VSATATSHSLVFLDKFTEYRIQLLAFNPAGDGPRSAPITVKTLPGVPSAPLHLRFSDITMQSLEV 1846
             ....|..|..|........:.|:|:|.||.. |..|:......|.....||....|  ..||.|
Human   387 -LCNTTELSCTFHLPSEAQEVALVAYNSAGTS-RPTPVVFSESRGPALTRLHAMARD--PHSLWV 447

  Fly  1847 TWDPPKFLNGEILGYLVTY-----ETTEENEKFSKQVKQKVSNTTLRVQNLEEEVTYTFTVRAQT 1906
            .|:||   |....||::.:     ..:..|:.:..:...:.:...|: :|:.....|...|....
Human   448 GWEPP---NPWPQGYVIEWGLGPPSASNSNKTWRMEQNGRATGFLLK-ENIRPFQLYEIIVTPLY 508

  Fly  1907 SVDYGPGISENVTTGPQDGSPVAPRDLILT---KTLSSVEMHWINGPS--GRGPILGYLIEAKKR 1966
            ....||  |::|....|:.:|....:|.|.   ||.:.:|  |:..|.  |:.|:..|.|     
Human   509 QDTMGP--SQHVYAYSQEMAPSHAPELHLKHIGKTWAQLE--WVPEPPELGKSPLTHYTI----- 564

  Fly  1967 DDSRWTKIEQTRKGMMQDFTV---------SYHILMPSTAYTFRVIAYNRYGISFPVYSKDSILT 2022
               .||..:.      |.|:.         ..|.|.|::.|...::|.::.|.:.........||
Human   565 ---FWTNAQN------QSFSAILNASSRGFVLHGLEPASLYHIHLMAASQAGATNSTVLTLMTLT 620

  Fly  2023 P--SKLHLEYG---------------------------------------------YLQHKPFYR 2040
            |  |:||:..|                                             .::..|..|
Human   621 PEGSELHIILGLFGLLLLLTCLCGTAWLCCSPNRKNPLWPSVPDPAHSSLGSWVPTIMEELPGPR 685

  Fly  2041 Q-TWFMVSLAATSIVIIVMVIAVL---CVKSKSYKYKQEAQKTLEESMAMSIDERQELALELYRS 2101
            | .|    |..||    .|..|:.   ||:. :::........:.:...:..||::.:..|.:.|
Human   686 QGQW----LGQTS----EMSRALTPHPCVQD-AFQLPGLGTPPITKLTVLEEDEKKPVPWESHNS 741

  Fly  2102 RHGVGTGTL----------NSVGTLRSGTLGT---------LGRKSTSRPPPGVHLGKSPPRP-- 2145
            ....|..||          .:|.|......||         ||  |.:.|.||.:|.....:|  
Human   742 SETCGLPTLVQTYVLQGDPRAVSTQPQSQSGTSDQVLYGQLLG--SPTSPGPGHYLRCDSTQPLL 804

  Fly  2146 ---SPASVAYHSDEESLKCYDENPDDSSVTEKPSE 2177
               :|:..:|    |:| .:..:|..:.||..||:
Human   805 AGLTPSPKSY----ENL-WFQASPLGTLVTPAPSQ 834

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sdkNP_001284756.1 Ig 71..157 CDD:299845
I-set 72..150 CDD:254352
Ig 172..245 CDD:299845
IG_like 280..356 CDD:214653
Ig 280..343 CDD:299845
IG_like 375..450 CDD:214653
Ig 378..447 CDD:143165
Ig 506..587 CDD:299845
IG_like 506..587 CDD:214653
I-set 592..682 CDD:254352
Ig 595..682 CDD:299845
FN3 686..789 CDD:238020
FN3 798..893 CDD:238020
FN3 901..1005 CDD:238020
fn3 1011..1094 CDD:278470
FN3 1108..1202 CDD:238020
FN3 1210..1308 CDD:238020
fn3 1317..1402 CDD:278470 4/6 (67%)
FN3 1415..1507 CDD:238020 28/105 (27%)
FN3 1513..1608 CDD:238020 21/114 (18%)
fn3 1617..1708 CDD:278470 14/102 (14%)
FN3 1722..1823 CDD:238020 25/112 (22%)
FN3 1828..1920 CDD:238020 21/96 (22%)
FN3 1927..2016 CDD:238020 22/102 (22%)
CSF3RNP_724781.1 Lep_receptor_Ig 24..110 CDD:283889 25/95 (26%)
FN3 249..329 CDD:238020 18/117 (15%)
FN3 345..423 CDD:238020 21/89 (24%)
fn3 430..514 CDD:278470 17/89 (19%)
FN3 527..607 CDD:214495 21/95 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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