DRSC/TRiP Functional Genomics Resources

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Protein Alignment sdk and Cntn1

DIOPT Version :9

Sequence 1:NP_001284756.1 Gene:sdk / 31017 FlyBaseID:FBgn0021764 Length:2265 Species:Drosophila melanogaster
Sequence 2:NP_001153119.1 Gene:Cntn1 / 12805 MGIID:105980 Length:1020 Species:Mus musculus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sdkNP_001284756.1 Ig 71..157 CDD:299845
I-set 72..150 CDD:254352
Ig 172..245 CDD:299845
IG_like 280..356 CDD:214653
Ig 280..343 CDD:299845
IG_like 375..450 CDD:214653
Ig 378..447 CDD:143165
Ig 506..587 CDD:299845
IG_like 506..587 CDD:214653
I-set 592..682 CDD:254352
Ig 595..682 CDD:299845
FN3 686..789 CDD:238020
FN3 798..893 CDD:238020
FN3 901..1005 CDD:238020
fn3 1011..1094 CDD:278470
FN3 1108..1202 CDD:238020
FN3 1210..1308 CDD:238020
fn3 1317..1402 CDD:278470
FN3 1415..1507 CDD:238020
FN3 1513..1608 CDD:238020
fn3 1617..1708 CDD:278470
FN3 1722..1823 CDD:238020
FN3 1828..1920 CDD:238020
FN3 1927..2016 CDD:238020
Cntn1NP_001153119.1 IgI_1_Contactin-1 40..134 CDD:409436
Ig strand B 61..65 CDD:409436
Ig strand C 74..78 CDD:409436
Ig strand E 96..100 CDD:409436
Ig strand F 111..116 CDD:409436
Ig strand G 125..128 CDD:409436
Ig2_Contactin-2-like 142..230 CDD:409392
Ig strand B 154..158 CDD:409392
Ig strand C 169..173 CDD:409392
Ig strand E 194..198 CDD:409392
Ig strand F 208..213 CDD:409392
Ig strand G 224..227 CDD:409392
IgI_3_Contactin-1 241..328 CDD:143259
Ig strand B 259..263 CDD:143259
Ig strand C 272..276 CDD:143259
Ig strand E 293..297 CDD:143259
Ig strand F 307..312 CDD:143259
Ig strand G 320..323 CDD:143259
Ig 332..408 CDD:416386
Ig strand A 332..335 CDD:409353
Ig strand A' 339..343 CDD:409353
Ig strand B 347..355 CDD:409353
Ig strand C 361..366 CDD:409353
Ig strand C' 368..371 CDD:409353
Ig strand E 374..379 CDD:409353
Ig strand F 388..395 CDD:409353
Ig strand G 399..408 CDD:409353
Ig5_Contactin-1 413..501 CDD:409438
Ig strand B 432..436 CDD:409438
Ig strand C 445..449 CDD:409438
Ig strand E 467..471 CDD:409438
Ig strand F 481..486 CDD:409438
Ig strand G 494..497 CDD:409438
Ig6_Contactin 503..603 CDD:409359
Ig strand B 522..526 CDD:409359
Ig strand C 537..541 CDD:409359
Ig strand E 568..572 CDD:409359
Ig strand F 582..587 CDD:409359
Ig strand G 595..598 CDD:409359
FN3 612..699 CDD:238020
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 695..719
FN3 711..803 CDD:238020
fn3 813..895 CDD:394996
FN3 907..991 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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