DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sdk and Dscaml1

DIOPT Version :9

Sequence 1:NP_001284756.1 Gene:sdk / 31017 FlyBaseID:FBgn0021764 Length:2265 Species:Drosophila melanogaster
Sequence 2:NP_001074739.2 Gene:Dscaml1 / 114873 MGIID:2150309 Length:2053 Species:Mus musculus


Alignment Length:2254 Identity:485/2254 - (21%)
Similarity:795/2254 - (35%) Gaps:690/2254 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 THPSSSGSIVSEGSTKILQCHALGYPQPTYRW-LKDGVPVGD-----------------FSSSQF 122
            |..||.|.:|        .|.|.|.|....|| |..|..:.|                 ||.|.|
Mouse    36 TFSSSVGVVV--------PCPAAGSPSAALRWYLATGDDIYDVPHIRHVHANGTLQLFPFSPSAF 92

  Fly   123 YRF-HSTRREDAGSYQCIARNDAGSIFSEKSDVVVAYMGIFENTTEGRLTVISGHPAIFD--MPP 184
            ..| |.      ..|.|.|.|.||.|.|....:...:...:....|.:.: :.|:.|:|.  :|.
Mouse    93 NSFIHD------NDYFCTAENAAGKIRSPNIRIKAVFREPYTVRVEDQRS-MRGNVAVFKCLIPS 150

  Fly   185 IESIPVPSVMWQSEDGPLNYDIKYAFTHANQLIILSADENDR-KGYRAKAINTQLGKEESSAFVH 248
            .....|..|.|:.:...:..:.::..|....|.|....:.|. ..||....:...|:...|....
Mouse   151 SVQEYVSVVSWEKDTVSITPENRFFITSHGGLYISDVQKEDALSTYRCITQHKYSGETRQSNGAR 215

  Fly   249 LNVSGDPYIEVAPEIIVRPQDVKVKVGTGVVELQCIANARPLHELETLWLKDGLAVETAGVRHTL 313
            |:|: || .|..|.|:......:|..|.. |||.|.|:..|:..:.  |||||..:..       
Mouse   216 LSVT-DP-AESIPTILDGFHSQEVWTGHS-VELPCAASGYPIPAIR--WLKDGRPLPA------- 268

  Fly   314 NDPWNRT---LALLQANSSHSGEYTCQVRLRSGGYPAVSASARLQILEP-PLFFTPMRAETFGEF 374
            :..|.:.   |.:....:..||.|.|:|   :..:.:..|:..|.:::| .:..||.:.:|  ..
Mouse   269 DSRWAKRITGLTISDLRTEDSGTYICEV---TNTFGSAEANGILTVIDPLHVTLTPKKLKT--GI 328

  Fly   375 GGQVQLTCDVVGEPTPQVKWFRNAESVDAHIESGRYTLN--TDNTLVIKKLILDDAAMFQCLAIN 437
            |..|.|:|.:.|.|...::|:||.|.|   :.....::.  ::.||:|.......:..:||.|..
Mouse   329 GSTVILSCALTGSPEFTIRWYRNTELV---LPGEAISIRGLSNETLLISSAQKSHSGAYQCFATR 390

  Fly   438 EAGENSASTWLRVKTKTAKNRVKRLAQPRILRVRASHAGLGSEKGSESGSSDRRKEFRFASAPIM 502
                         |.:||::                                      ||...:.
Mouse   391 -------------KAQTAQD--------------------------------------FAIIVLE 404

  Fly   503 ELPPQNVTALD------GKDATISCRAVGSPNPNITWIYNETQLV-DISSRV-QILESGDLLISN 559
            :..|:.|::..      |:..::.|.|.|:|.|.:||..::..:| |.|.|. |...|....||:
Mouse   405 DGTPRIVSSFSEKVVNPGEQFSLMCAAKGAPPPTVTWALDDEPVVRDGSHRTNQYTMSDGTTISH 469

  Fly   560 IRSV-----DAGLYICVRANEAGSVKGEAYLSVLVRTQIIQPPV-----DTTVLLGLTATLQCKV 614
            :...     |.|:|.|...|..||.:.:|      |..:..||.     :.|.:.|....:.|:|
Mouse   470 MNVTGPQIRDGGVYRCTARNSVGSAEYQA------RINVRGPPSIRAMRNITAVAGRDTLINCRV 528

  Fly   615 SSDPSVPYNIDWYREGQSSTPISNSQRIGVQADGQLEIQAV-RASDVGSYAC-VVTSPGGNETRA 677
            ...|.  |:|.||::   :..:.::.|..|..:|.|::..| :..|.|.|.| |:..|..:.:::
Mouse   529 IGYPY--YSIKWYKD---ALLLPDNHRQVVFENGTLKLTDVQKGMDEGEYLCSVLIQPQLSISQS 588

  Fly   678 ARLSVIELP------FPPSNV-KVERLP---EPQQRSINVSWTPGFDGNSPI--SKFIIQRRE-V 729
            ..::|...|      |||::: ::..:|   ......|.::|..  ||...|  |...|:.:| :
Mouse   589 VHVAVKVPPLIQPFEFPPASIGQLLYIPCVVSSGDMPIRITWRK--DGQVIISGSGVTIESKEFM 651

  Fly   730 SELGPVPDPLLNWITELSNVSA--DQRWILLENLKAATVYQFRVSAVNRVGEGSPSEPSNVVELP 792
            |.|            ::|:||.  :..:..:.:..||||.:.| ..:.||......:|:|     
Mouse   652 SSL------------QISSVSLKHNGNYTCIASNAAATVSRER-QLIVRVPPRFVVQPNN----- 698

  Fly   793 QEAPSGPPVGFVGSARSMSEIITQWQPP--LEEHRNGQILGYILRYRLFG----YNNVPWSYQNI 851
            |:       |..|.|..::..:..:.||  :.:|..|.           |    |:.||     :
Mouse   699 QD-------GIYGKAGVLNCSVDGYPPPKVMWKHAKGS-----------GNPQQYHPVP-----L 740

  Fly   852 TNEAQ----RNFLIQELITWKDYIVQIAAYNNMGVGVYTEGSK-----IKTKEGVPEAPPTNVKV 907
            |...|    .:.||:.::. :|....:...:|   ||.|:.||     :|....:...|.|.:.:
Mouse   741 TGRIQILPNSSLLIRHVLE-EDIGYYLCQASN---GVGTDISKAMFLTVKIPAMITSHPNTTIAI 801

  Fly   908 EAINSTAARCRWTPPNPQQINGINQGYK--IQAWQRRLIDGEWRDIERRMKTVPPSLIDPLAEQT 970
            :.             :|:::|...:|.:  |..|::    |:             ::|||     
Mouse   802 KG-------------HPKELNCTARGERPIIIRWEK----GD-------------TVIDP----- 831

  Fly   971 AILGGLEKFTEYNISVLCFTDPGDGVASSQVAVMTMDDVPDEVTGLHFDDVSDRSVKVLWAPPRA 1035
                  ::...|.|:.   .|.||.|.|                                     
Mouse   832 ------DRVMRYAIAT---KDNGDEVVS------------------------------------- 850

  Fly  1036 SNGILTGYTVRYQVKDRPDTL----KSFNLTADD---TELTVNQLQATTHYWFEIVAWTRVGSGI 1093
                    |::.:..||.|::    .:.|...:|   .:|||.:                     
Mouse   851 --------TLKLKPADRGDSVFFSCHAINSYGEDRGLIQLTVQE--------------------- 886

  Fly  1094 PKTATIQSGVEPVLPHAPTALALSNIEAFSVVLQFTPGFDGNSSITKWKVE----------GQTA 1148
                          |..|..|.:..::|.|:.|::|..|||||.||.:.:|          .|:.
Mouse   887 --------------PPDPPELEIREVKARSMNLRWTQRFDGNSIITGFDIEYKNKSDSWDFKQST 937

  Fly  1149 RNMTWFTICEINDPDAETLTVTGLVPFTQYRLRLSASNVVGSSKPS-EATKDFQTIQARPKHPPF 1212
            ||::         |......:..|.|.:.|.:|:.:.|.:|.|:|| |.|  ..|.:|.|..||.
Mouse   938 RNIS---------PTINQANIVDLHPASVYSIRMYSFNKIGRSEPSKELT--ISTEEAAPDGPPM 991

  Fly  1213 NVTVRAMSAQQLRVRWIPLQQTEWYGNPRGYNISYKQLVKTPGTI-KYVPRSVVIEDHTANSHV- 1275
            :||::.:::|.::|.|...::....|..|||.|.|::  .:||:. :|   |:|....|.:|.| 
Mouse   992 DVTLQPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRE--NSPGSNGQY---SIVEMKATGDSEVY 1051

  Fly  1276 -LDSLEEWTLYEVKMNACNDVGCSKESDTAVERTREAVPSYGPLDVQANATSSTTVVVQWGEVPR 1339
             ||:|:::..|.|.:.|.|..|....|......|.|.|||..|.:|:|.:.:|...|:.|.|.||
Mouse  1052 TLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTLEDVPSQPPENVRALSITSDVAVISWSEPPR 1116

  Fly  1340 QHRNGQIDGYKV----FYAAADRGQQVLHKTIPNNATFTTTLTELK---KYVVYHVQVLAYTRLG 1397
            ...||.:.||:|    .|...:.|:.       .|.|.|....||:   |:..|.|||||||:.|
Mouse  1117 STLNGVLKGYRVIFWSLYVDGEWGEM-------QNVTTTRERVELRGMEKFTNYSVQVLAYTQAG 1174

  Fly  1398 NGALSTPPIRVQTFEDTPGVPSNVSFPDVSLTMARIIWDVPVDPNGKILAYQVTYTLNGSAMLNY 1462
            :|..|: .:.:||.||.||.|:.:.....|.:...:.|..|..|||.|..|.:..:..||.....
Mouse  1175 DGVRSS-VLYIQTKEDVPGPPAGIKAVPSSASSVVVSWLPPTKPNGVIRKYTIFCSSPGSGQPAP 1238

  Fly  1463 SR-EFPPSDRTFRATELLPGKYYSFSCTAQTRLG------------------------------W 1496
            |. |..|....:|...|..|:.|.....|.|..|                              |
Mouse  1239 SEYETSPEQLFYRIAHLNRGQQYLLWVAAVTSAGRGNSSEKVTIEPAGKAPAKIISFGGTVTTPW 1303

  Fly  1497 -----------GKIATALVYTTNNRER--PQA--------------------------------- 1515
                       |..|.|:.:|.::.:.  |.:                                 
Mouse  1304 MKDVRLPCNSVGDPAPAVKWTKDSEDSAIPVSLDGHRLIHTNGTLLLRAVKAEDSGYYTCTATNT 1368

  Fly  1516 ---------------PSVPQISRSQIQAHQITFSWTPGRDGFAPLRYYTVEMR-ENEGRWQPLPE 1564
                           |..|:::.|:..|..||.:|.||.:|.:.:|.:.::.. :|...|:.:  
Mouse  1369 GGFDTIIVNLLVQVPPDQPRLTVSKTSASSITLTWIPGDNGGSSIRGFVLQYSVDNSEEWKDV-- 1431

  Fly  1565 RVDPSLSSFTAVGLRPYMTYQFRIQATNDLGPSAFSRESVIVRTLPAAPAVGVGGLKVVPITTTS 1629
            .:..|..||....|:....|:.::.|.|.:|....| |.:..:|....|:..........|.:|.
Mouse  1432 FISSSERSFKLDSLKCGTWYKVKLAAKNSVGSGRIS-EIIEAKTHGREPSFSKDQHLFTHINSTH 1495

  Fly  1630 VRVQWSALETALWNGDASTGGYRILYQQLSDFPTA--LQSTPKTD--VHGINENS---VVLSDLQ 1687
            .|:....     ||    .||..|         ||  |:..||..  ..|:..||   |.|::|:
Mouse  1496 ARLNLQG-----WN----NGGCPI---------TAIVLEYRPKGTWAWQGVRANSSTEVFLTELR 1542

  Fly  1688 QDRNYEIVVLPFNSQGPGPATPPAAV--YVGEAVPTGEPRAVDAAPISSTEVRLLWKPPKQSMQN 1750
            :...||:.:...||.|.|..|...|.  |.|..:|                      |.|.:...
Mouse  1543 EATWYELRMRACNSAGCGNETAQFATLDYDGSTIP----------------------PIKSAQGE 1585

  Fly  1751 GD---------------ILGYKIYYLVTYSPQALEPGRKWEEEIEVVS-ATATSHSLVFLDKFTE 1799
            ||               .||..:.::|          ||..:|..:.. ..|.|.:.:.:.|...
Mouse  1586 GDDVKKLFTIGCPVILATLGVALLFVV----------RKKRKEKRLKRLRDAKSLAEMLISKNNR 1640

  Fly  1800 Y-------------------RIQLL-----AFNPAGDGPRSAPIT-------VKTLPGVPSAPLH 1833
            .                   |:|||     .....||...:.|:|       |..........||
Mouse  1641 SFDTPVKGPPQGPRLHIDIPRVQLLIEDKEGIKQLGDDKATIPVTDAEFSQAVNPQSFCTGVSLH 1705

  Fly  1834 -----------LRFSDI-----------------TMQSLEVTW--------DPPKFLN------G 1856
                       :..|||                 |.......|        .|.:.|.      |
Mouse  1706 HPALIQSTGPLIDMSDIRPGTNPVSRKNVKSAHSTRNRYSSQWTLTKCQASTPARTLTSDWRTVG 1770

  Fly  1857 EILGYLVTYETTEENEKFSKQVKQ---KVSNTTLRVQN----------------LEE-------E 1895
            ...|..||     |::.:|..:.|   |..|:.:..::                |||       |
Mouse  1771 SQHGVTVT-----ESDSYSASLSQDTDKGRNSMVSTESASSTYEELARAYEHAKLEEQLQHAKFE 1830

  Fly  1896 VTYTFTVRAQTSVDYGPGISEN------VTTGPQDG------SPVAPRDLILTKTLSSVEMHWIN 1948
            :|..| :...:|.....|.:||      ::|..:.|      ||..|:|....|.::....|..|
Mouse  1831 ITECF-ISDSSSDQMTTGTNENADSMTSMSTPSEPGICRFTASPPKPQDADRGKNVAVPIPHRAN 1894

  Fly  1949 GPSGRGPILGYLIEA--KKRDDSRWTKIEQTRKGMMQDFTVSYH 1990
            ........|....||  :|.|......:...|:..|::.|.:||
Mouse  1895 KSDYCNLPLYTKSEAFFRKADGREPCPVVPPREASMRNLTRAYH 1938

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sdkNP_001284756.1 Ig 71..157 CDD:299845 28/99 (28%)
I-set 72..150 CDD:254352 27/92 (29%)
Ig 172..245 CDD:299845 14/75 (19%)
IG_like 280..356 CDD:214653 19/78 (24%)
Ig 280..343 CDD:299845 17/65 (26%)
IG_like 375..450 CDD:214653 17/76 (22%)
Ig 378..447 CDD:143165 16/70 (23%)
Ig 506..587 CDD:299845 26/93 (28%)
IG_like 506..587 CDD:214653 26/93 (28%)
I-set 592..682 CDD:254352 22/96 (23%)
Ig 595..682 CDD:299845 22/93 (24%)
FN3 686..789 CDD:238020 27/117 (23%)
FN3 798..893 CDD:238020 22/109 (20%)
FN3 901..1005 CDD:238020 18/105 (17%)
fn3 1011..1094 CDD:278470 9/89 (10%)
FN3 1108..1202 CDD:238020 30/104 (29%)
FN3 1210..1308 CDD:238020 30/100 (30%)
fn3 1317..1402 CDD:278470 32/91 (35%)
FN3 1415..1507 CDD:238020 27/133 (20%)
FN3 1513..1608 CDD:238020 24/143 (17%)
fn3 1617..1708 CDD:278470 25/97 (26%)
FN3 1722..1823 CDD:238020 22/147 (15%)
FN3 1828..1920 CDD:238020 28/165 (17%)
FN3 1927..2016 CDD:238020 16/66 (24%)
Dscaml1NP_001074739.2 IGc2 43..110 CDD:197706 20/80 (25%)
Ig 125..218 CDD:353325 17/93 (18%)
I-set 226..311 CDD:336764 24/97 (25%)
Ig_3 317..389 CDD:339005 19/76 (25%)
Ig 408..498 CDD:353325 25/89 (28%)
IGc2 519..577 CDD:197706 17/62 (27%)
Ig 615..681 CDD:319273 18/79 (23%)
Ig_DSCAM 707..785 CDD:143211 19/97 (20%)
Ig 803..891 CDD:353325 26/211 (12%)
FN3 887..981 CDD:238020 30/104 (29%)
FN3 988..1085 CDD:238020 30/101 (30%)
FN3 1093..1186 CDD:238020 33/100 (33%)
FN3 1191..1282 CDD:238020 23/90 (26%)
Ig 1307..1377 CDD:319273 5/69 (7%)
FN3 1384..1474 CDD:238020 23/92 (25%)
FN3 1488..1560 CDD:238020 24/89 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1716..1741 3/24 (13%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1773..1803 8/34 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1840..1862 5/21 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1974..2053
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
32.770

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