Protein Alignment SkpA and SKP1

DIOPT Version :9

• Sequence 1: NP_001033818.1
• Gene: SkpA / 31016
• FlyBaseID: FBgn0025637
• Length: 162
• Species: Drosophila melanogaster
• Sequence 2: NP_010615.3
• Gene: SKP1 / 851928
• SGDID: S000002736
• Length: 194
• Species: Saccharomyces cerevisiae
• Alignment Length: 191
• Identity: 80/191 - (41%)
• Similarity: 113/191 - (59%)
• Gaps: 32/191 - (16%)

  Fly     3 SIKLQSSDEEIFDTDIQIAKCSGTIKTMLEDC-------------------------------GM 36
            ::.|.|.:.|.|..|.:||:.|..:|..|.|.                               ..
Yeast     5 NVVLVSGEGERFTVDKKIAERSLLLKNYLNDMHDSNLQNNSDSESDSDSETNHKSKDNNNGDDDD 69

  Fly    37 EDDENAIVPLPNVNSTILRKVLTWAHYHKDDPQPTEDDESKEKRTDDIISWDADFLKVDQGTLFE 101
            |||:..::|:|||.|::|:||:.||.:|:|...|.|||:...| :..:.|||.:||||||..|:|
Yeast    70 EDDDEIVMPVPNVRSSVLQKVIEWAEHHRDSNFPDEDDDDSRK-SAPVDSWDREFLKVDQEMLYE 133

  Fly   102 LILAANYLDIKGLLELTCKTVANMIKGKTPEEIRKTFNIKKDFSPAEEEQVRKENEWCEEK 162
            :|||||||:||.||:..||.||.||:|::|||||:||||..||:|.||..:|:||||.|::
Yeast   134 IILAANYLNIKPLLDAGCKVVAEMIRGRSPEEIRRTFNIVNDFTPEEEAAIRRENEWAEDR 194

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpA	NP_001033818.1	BTB_POZ_SKP1	4..126	CDD:349631	57/152 (38%)
		Skp1	112..159	CDD:396171	28/46 (61%)
SKP1	NP_010615.3	SKP1	3..194	CDD:227528	80/189 (42%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C157344324
Domainoid	1	1.000	67	1.000	Domainoid score	I2347
eggNOG	1	0.900	-	-		E1_COG5201
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H38775
Inparanoid	1	1.050	154	1.000	Inparanoid score	I1094
Isobase	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG54148
OrthoFinder	1	1.000	-	-		FOG0000367
OrthoInspector	1	1.000	-	-		otm46619
orthoMCL	1	0.900	-	-		OOG6_100934
Panther	1	1.100	-	-	LDO	PTHR11165
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1343
SonicParanoid	1	1.000	-	-		X346
TreeFam	1	0.960	-	-
	15	14.790