Protein Alignment SkpA and SK4

DIOPT Version :10

• Sequence 1: NP_477390.1
• Gene: SkpA / 31016
• FlyBaseID: FBgn0025637
• Length: 162
• Species: Drosophila melanogaster
• Sequence 2: NP_564105.1
• Gene: SK4 / 838604
• AraportID: AT1G20140
• Length: 163
• Species: Arabidopsis thaliana
• Alignment Length: 169
• Identity: 82/169 - (48%)
• Similarity: 107/169 - (63%)
• Gaps: 24/169 - (14%)

  Fly     4 IKLQSSDEEIFDTDIQIAKCSGTIKTMLE-DCGMEDDENAIVPLPNVNSTILRKVLTWAHYH--- 64
            |.|:|||.|.|:.:..:|..|.|||.|:| ||.    :|.| |||||...||.||:.:...|
plant     8 IILKSSDGESFEIEEAVAVKSQTIKHMIEDDCA----DNGI-PLPNVTGAILAKVIEYCKKHVEA 67

  Fly    65 -------KDDPQPTEDDESKEKRTDDIISWDADFLKVDQGTLFELILAANYLDIKGLLELTCKTV 122
                   ||.....|:||.|        :||::|:||||.|||:||||||||:|.|||:||||.|
plant    68 AAEAGGDKDFYGSAENDELK--------NWDSEFVKVDQPTLFDLILAANYLNIGGLLDLTCKAV 124

  Fly   123 ANMIKGKTPEEIRKTFNIKKDFSPAEEEQVRKENEWCEE 161
            |:.::|||||::|..||||.|::|.||.:||.||:|..|
plant   125 ADQMRGKTPEQMRAHFNIKNDYTPEEEAEVRNENKWAFE 163

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpA	NP_477390.1	BTB_POZ_SKP1	4..126	CDD:349631	62/132 (47%)
		Skp1	112..159	CDD:460222	27/46 (59%)
SK4	NP_564105.1	BTB_POZ_SKP1	7..128	CDD:349631	62/132 (47%)
		Skp1	115..161	CDD:460222	27/45 (60%)