Protein Alignment SkpA and SK5

DIOPT Version :10

• Sequence 1: NP_477390.1
• Gene: SkpA / 31016
• FlyBaseID: FBgn0025637
• Length: 162
• Species: Drosophila melanogaster
• Sequence 2: NP_567091.1
• Gene: SK5 / 825172
• AraportID: AT3G60020
• Length: 153
• Species: Arabidopsis thaliana
• Alignment Length: 161
• Identity: 67/161 - (41%)
• Similarity: 99/161 - (61%)
• Gaps: 21/161 - (13%)

  Fly     4 IKLQSSDEEIFDTDIQIAKCSGTIKTMLEDCGMEDDENAIVPLPNVNSTILRKVLTWAHYHKDDP 68
            |.|:|||.:.|:.|..:|:.|..|..|:|| |...|   ::||.||.|.||:.|:.:...|
plant     5 IMLKSSDGKSFEIDEDVARKSIAINHMVED-GCATD---VIPLRNVTSKILKIVIDYCEKH---- 61

  Fly    69 QPTEDDESKEKRTDDIISWDADFLKVDQGT-LFELILAANYLDIKGLLELTCKTV-----ANMIK 127
                   .|.|..:|:..|||||:|..:.| ||::::|||||:|:.||:||||||     |:::.
plant    62 -------VKSKEEEDLKEWDADFMKTIETTILFDVMMAANYLNIQSLLDLTCKTVSDLLQADLLS 119

  Fly   128 GKTPEEIRKTFNIKKDFSPAEEEQVRKENEW 158
            ||||:|||..|||:.|.:..|..::|:||:|
plant   120 GKTPDEIRAHFNIENDLTAEEVAKIREENQW 150

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpA	NP_477390.1	BTB_POZ_SKP1	4..126	CDD:349631	51/127 (40%)
		Skp1	112..159	CDD:460222	25/52 (48%)
SK5	NP_567091.1	BTB_POZ_SKP1	4..112	CDD:349631	50/121 (41%)
		Skp1	99..151	CDD:460222	25/52 (48%)