Protein Alignment SkpA and SK20

DIOPT Version :9

• Sequence 1: NP_001033818.1
• Gene: SkpA / 31016
• FlyBaseID: FBgn0025637
• Length: 162
• Species: Drosophila melanogaster
• Sequence 2: NP_001078065.1
• Gene: SK20 / 819203
• AraportID: AT2G45950
• Length: 352
• Species: Arabidopsis thaliana
• Alignment Length: 150
• Identity: 45/150 - (30%)
• Similarity: 80/150 - (53%)
• Gaps: 13/150 - (8%)

  Fly     4 IKLQSSDEEIFDTDIQIAKCSGTIKTMLEDCGMEDDENAIVPLP-NVNSTILRKVLTWAHYHKDD 67
            |.||::|..|...:.::|.....|...:...|:...:|..:.|| .||..:...:|.:..:|:
plant    18 IWLQTADGSIQQVEQEVAMFCPMICQEVIQKGVGSSKNHAISLPQRVNPAMFSLILDYCRFHQ-- 80

  Fly    68 PQPTEDDESKEKRTDDIISWDADFLKVDQGTLFELILAANYLDIKGLLELTCKTVANMIKGKTPE 132
               .....:||::|     :|..|:::|...|.||..||:.|.:|.|::||.:.:|.:|:||.||
plant    81 ---LPGRSNKERKT-----YDERFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKNPE 137

  Fly   133 EIRKTFNIKKDFSPAEEEQV 152
            |||:.|::..|.:  |||::
plant   138 EIREIFHLPDDLT--EEEKL 155

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpA	NP_001033818.1	BTB_POZ_SKP1	4..126	CDD:349631	32/122 (26%)
		Skp1	112..159	CDD:396171	18/40 (45%)
SK20	NP_001078065.1	Skp1	15..116	CDD:214704	27/107 (25%)
		Skp1	90..153	CDD:279768	26/69 (38%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5201
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR11165
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.910