Protein Alignment SkpA and SK3

DIOPT Version :9

• Sequence 1: NP_001033818.1
• Gene: SkpA / 31016
• FlyBaseID: FBgn0025637
• Length: 162
• Species: Drosophila melanogaster
• Sequence 2: NP_565604.1
• Gene: SK3 / 817111
• AraportID: AT2G25700
• Length: 163
• Species: Arabidopsis thaliana
• Alignment Length: 168
• Identity: 76/168 - (45%)
• Similarity: 103/168 - (61%)
• Gaps: 22/168 - (13%)

  Fly     4 IKLQSSDEEIFDTDIQIAKCSGTIKTMLEDCGMEDDENAIVPLPNVNSTILRKVLTWAHYH---- 64
            |.|:|||.|.|:.:..:|..|.|||.|:||..:::.    :|||||...||.||:.:...|
plant     8 IILKSSDGESFEVEEAVAVESQTIKHMIEDDCVDNG----IPLPNVTGAILAKVIEYCKKHVEAA 68

  Fly    65 ------KDDPQPTEDDESKEKRTDDIISWDADFLKVDQGTLFELILAANYLDIKGLLELTCKTVA 123
                  ||....||:.|.|        :||.||:|||..|||:|:.|||||:|.|||:||||.||
plant    69 AEAGGDKDFYGSTENHELK--------TWDNDFVKVDHPTLFDLLRAANYLNISGLLDLTCKAVA 125

  Fly   124 NMIKGKTPEEIRKTFNIKKDFSPAEEEQVRKENEWCEE 161
            :.::||||.::|:.||||.|::|.||.:||.||.|..|
plant   126 DQMRGKTPAQMREHFNIKNDYTPEEEAEVRNENRWAFE 163

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpA	NP_001033818.1	BTB_POZ_SKP1	4..126	CDD:349631	57/131 (44%)
		Skp1	112..159	CDD:396171	26/46 (57%)
SK3	NP_565604.1	BTB_POZ_SKP1	7..128	CDD:349631	57/131 (44%)
		Skp1	115..161	CDD:396171	26/45 (58%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	51	1.000	Domainoid score	I4316
eggNOG	1	0.900	-	-		E1_COG5201
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	166	1.000	Inparanoid score	I1572
OMA	1	1.010	-	-		QHG54148
OrthoDB	1	1.010	-	-		D1412723at2759
OrthoFinder	1	1.000	-	-		FOG0000367
OrthoInspector	1	1.000	-	-		mtm992
orthoMCL	1	0.900	-	-		OOG6_100934
Panther	1	1.100	-	-	O	PTHR11165
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X346
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	13	12.930