Protein Alignment SkpA and SK16

DIOPT Version :10

• Sequence 1: NP_477390.1
• Gene: SkpA / 31016
• FlyBaseID: FBgn0025637
• Length: 162
• Species: Drosophila melanogaster
• Sequence 2: NP_565297.1
• Gene: SK16 / 814848
• AraportID: AT2G03190
• Length: 170
• Species: Arabidopsis thaliana
• Alignment Length: 166
• Identity: 64/166 - (38%)
• Similarity: 100/166 - (60%)
• Gaps: 12/166 - (7%)

  Fly     4 IKLQSSDEEIFDTDIQIAKCSGTIKTMLEDCGMEDDENAIVPLPNVNSTILRKVLTWAHYHKDDP 68
            |.|.|||:|.|:.:..:|:....|..|::|    |..:..:||.||...||..|:.:...|..|.
plant     6 IVLTSSDDESFEVEEAVARKLKVIAHMIDD----DCADKAIPLENVTGNILALVIEYCKKHVLDD 66

  Fly    69 QPTEDDESK-------EKRTDDIISWDADFLK-VDQGTLFELILAANYLDIKGLLELTCKTVANM 125
            ....||.::       |:..:::.:|||:|:| .|..|:.:||||.|||:::.||.|||:|||:.
plant    67 VDDSDDSTEATSENVNEEAKNELRTWDAEFMKEFDMETVMKLILAVNYLNVQDLLGLTCQTVADH 131

  Fly   126 IKGKTPEEIRKTFNIKKDFSPAEEEQVRKENEWCEE 161
            :|..:|||:|:.|||:.|::|.||:.:||||.|..|
plant   132 MKDMSPEEVRELFNIENDYTPEEEDAIRKENAWAFE 167

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpA	NP_477390.1	BTB_POZ_SKP1	4..126	CDD:349631	46/129 (36%)
		Skp1	112..159	CDD:460222	24/46 (52%)
SK16	NP_565297.1	BTB_POZ_SKP1	5..132	CDD:349631	46/129 (36%)
		Skp1	118..165	CDD:460222	24/46 (52%)