Protein Alignment SkpA and SkpF

DIOPT Version :9

• Sequence 1: NP_001033818.1
• Gene: SkpA / 31016
• FlyBaseID: FBgn0025637
• Length: 162
• Species: Drosophila melanogaster
• Sequence 2: NP_611796.1
• Gene: SkpF / 37713
• FlyBaseID: FBgn0034863
• Length: 171
• Species: Drosophila melanogaster
• Alignment Length: 161
• Identity: 97/161 - (60%)
• Similarity: 123/161 - (76%)
• Gaps: 0/161 - (0%)

  Fly     1 MPSIKLQSSDEEIFDTDIQIAKCSGTIKTMLEDCGMEDDENAIVPLPNVNSTILRKVLTWAHYHK 65
            ||.|||||||.|||:|||:.||||.||||:||||.:|.:.:.::||||||||||:|||.||.:|:
  Fly     1 MPVIKLQSSDGEIFETDIETAKCSSTIKTLLEDCPVEAENDTLIPLPNVNSTILKKVLIWAKHHR 65

  Fly    66 DDPQPTEDDESKEKRTDDIISWDADFLKVDQGTLFELILAANYLDIKGLLELTCKTVANMIKGKT 130
            :|.....::|:.:.....|..|||:||.:|||||||||||||||||..||...|.||||||||:|
  Fly    66 EDIAEENEEEAAKSVAVQITPWDAEFLSMDQGTLFELILAANYLDIPNLLNAACMTVANMIKGRT 130

  Fly   131 PEEIRKTFNIKKDFSPAEEEQVRKENEWCEE 161
            .||||:||:|..||||:||:.:..|:|..:|
  Fly   131 TEEIRQTFHITNDFSPSEEDLMTMESEVPQE 161

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpA	NP_001033818.1	BTB_POZ_SKP1	4..126	CDD:349631	74/121 (61%)
		Skp1	112..159	CDD:396171	27/46 (59%)
SkpF	NP_611796.1	SKP1	1..157	CDD:227528	95/155 (61%)
		Skp1	1..111	CDD:214704	67/109 (61%)
		Skp1	87..157	CDD:279768	48/69 (70%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45452338
Domainoid	1	1.000	51	1.000	Domainoid score	I4316
eggNOG	1	0.900	-	-		E1_COG5201
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	166	1.000	Inparanoid score	I1572
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1412723at2759
OrthoFinder	1	1.000	-	-		FOG0000367
OrthoInspector	1	1.000	-	-		otm46619
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR11165
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X346
	10	9.900