Protein Alignment SkpA and SkpB

DIOPT Version :9

• Sequence 1: NP_001033818.1
• Gene: SkpA / 31016
• FlyBaseID: FBgn0025637
• Length: 162
• Species: Drosophila melanogaster
• Sequence 2: NP_610729.1
• Gene: SkpB / 36298
• FlyBaseID: FBgn0026176
• Length: 161
• Species: Drosophila melanogaster
• Alignment Length: 162
• Identity: 119/162 - (73%)
• Similarity: 140/162 - (86%)
• Gaps: 1/162 - (0%)

  Fly     1 MPSIKLQSSDEEIFDTDIQIAKCSGTIKTMLEDCGMEDDENAIVPLPNVNSTILRKVLTWAHYHK 65
            ||.|:|:|:|:||||||.:|||||.||:..:||.|.|.| |:::|||||||.||:|||.||.|||
  Fly     1 MPIIRLESADKEIFDTDQEIAKCSETIRIAIEDLGDESD-NSVLPLPNVNSLILKKVLHWATYHK 64

  Fly    66 DDPQPTEDDESKEKRTDDIISWDADFLKVDQGTLFELILAANYLDIKGLLELTCKTVANMIKGKT 130
            |||..||:.|:||||||||.||||||||||||||||||||||||:|:|||::||||||||||||:
  Fly    65 DDPVVTEEVENKEKRTDDISSWDADFLKVDQGTLFELILAANYLNIQGLLDVTCKTVANMIKGKS 129

  Fly   131 PEEIRKTFNIKKDFSPAEEEQVRKENEWCEEK 162
            |:.||.||.|:.||.|.|||||||||||||:|
  Fly   130 PQAIRDTFAIQNDFLPQEEEQVRKENEWCEDK 161

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpA	NP_001033818.1	BTB_POZ_SKP1	4..126	CDD:349631	89/121 (74%)
		Skp1	112..159	CDD:396171	34/46 (74%)
SkpB	NP_610729.1	SKP1	1..161	CDD:227528	118/160 (74%)
		Skp1	1..110	CDD:214704	80/109 (73%)
		Skp1	84..158	CDD:279768	59/73 (81%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45452344
Domainoid	1	1.000	60	1.000	Domainoid score	I3858
eggNOG	1	0.900	-	-		E1_COG5201
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	166	1.000	Inparanoid score	I1572
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1412723at2759
OrthoFinder	1	1.000	-	-		FOG0000367
OrthoInspector	1	1.000	-	-		otm25944
orthoMCL	1	0.900	-	-		OOG6_100934
Panther	1	1.100	-	-	P	PTHR11165
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X346
	11	10.800