Protein Alignment SkpA and SkpC

DIOPT Version :9

• Sequence 1: NP_001033818.1
• Gene: SkpA / 31016
• FlyBaseID: FBgn0025637
• Length: 162
• Species: Drosophila melanogaster
• Sequence 2: NP_608358.1
• Gene: SkpC / 32996
• FlyBaseID: FBgn0026175
• Length: 158
• Species: Drosophila melanogaster
• Alignment Length: 155
• Identity: 92/155 - (59%)
• Similarity: 116/155 - (74%)
• Gaps: 2/155 - (1%)

  Fly     2 PSIKLQSSDEEIFDTDIQIAKCSGTIKTMLEDCGMEDDENAIVPLPNVNSTILRKVLTWAHYHK- 65
            |:|||:|||..||.|:::.||.|.|||||||...:|:|||||||||.||:.||.|:|||.::||
  Fly     4 PTIKLESSDGMIFSTEVRAAKLSETIKTMLEVSAVENDENAIVPLPKVNAFILSKILTWIYHHKD 68

  Fly    66 DDPQPTEDDESKEKRTDDIISWDADFLKVDQGTLFELILAANYLDIKGLLELTCKTVANMIKGKT 130
            ||....|..|...:...||.:|||:|:.|||.||||:|||||||:||||::|.||||||||:|||
  Fly    69 DDAHGAEGVELSPQSPHDISAWDANFINVDQPTLFEIILAANYLEIKGLVDLCCKTVANMIRGKT 133

  Fly   131 PEEIRKTFNIKKDFSPAEEEQVRKE 155
            |||||.|||| .|..|:...|:.::
  Fly   134 PEEIRHTFNI-PDEIPSRTAQLGED 157

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpA	NP_001033818.1	BTB_POZ_SKP1	4..126	CDD:349631	74/122 (61%)
		Skp1	112..159	CDD:396171	27/44 (61%)
SkpC	NP_608358.1	Skp1	6..114	CDD:214704	63/107 (59%)
		Skp1	88..>146	CDD:279768	43/58 (74%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45452337
Domainoid	1	1.000	51	1.000	Domainoid score	I4316
eggNOG	1	0.900	-	-		E1_COG5201
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	166	1.000	Inparanoid score	I1572
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1412723at2759
OrthoFinder	1	1.000	-	-		FOG0000367
OrthoInspector	1	1.000	-	-		otm46619
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR11165
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X346
	10	9.900