Protein Alignment SkpA and Skp1

DIOPT Version :10

• Sequence 1: NP_477390.1
• Gene: SkpA / 31016
• FlyBaseID: FBgn0025637
• Length: 162
• Species: Drosophila melanogaster
• Sequence 2: NP_035673.3
• Gene: Skp1 / 21402
• MGIID: 103575
• Length: 163
• Species: Mus musculus
• Alignment Length: 163
• Identity: 124/163 - (76%)
• Similarity: 142/163 - (87%)
• Gaps: 1/163 - (0%)

  Fly     1 MPSIKLQSSDEEIFDTDIQIAKCSGTIKTMLEDCGMEDD-ENAIVPLPNVNSTILRKVLTWAHYH 64
            ||:|||||||.|||:.|::|||.|.||||||||.||:|: ::..|||||||:.||:||:.|..:|
Mouse     1 MPTIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHH 65

  Fly    65 KDDPQPTEDDESKEKRTDDIISWDADFLKVDQGTLFELILAANYLDIKGLLELTCKTVANMIKGK 129
            ||||.|.||||:||||||||..||.:|||||||||||||||||||||||||::||||||||||||
Mouse    66 KDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGK 130

  Fly   130 TPEEIRKTFNIKKDFSPAEEEQVRKENEWCEEK 162
            ||||||||||||.||:..||.||||||:|||||
Mouse   131 TPEEIRKTFNIKNDFTEEEEAQVRKENQWCEEK 163

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpA	NP_477390.1	BTB_POZ_SKP1	4..126	CDD:349631	90/122 (74%)
		Skp1	112..159	CDD:460222	38/46 (83%)
Skp1	NP_035673.3	BTB_POZ_SKP1	3..127	CDD:349631	90/123 (73%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	63..83		14/19 (74%)
		Interaction with the F-box domain of F-box proteins. /evidence=ECO:0000250	104..163		50/58 (86%)
		Skp1	113..160	CDD:460222	38/46 (83%)