Protein Alignment SkpA and skr-16

DIOPT Version :9

• Sequence 1: NP_001033818.1
• Gene: SkpA / 31016
• FlyBaseID: FBgn0025637
• Length: 162
• Species: Drosophila melanogaster
• Sequence 2: NP_501128.2
• Gene: skr-16 / 191765
• WormBaseID: WBGene00004822
• Length: 181
• Species: Caenorhabditis elegans
• Alignment Length: 166
• Identity: 52/166 - (31%)
• Similarity: 73/166 - (43%)
• Gaps: 38/166 - (22%)

  Fly     6 LQSSDEEIFDTDIQIAKCSGTIKTMLEDCGMEDDENAIVPLPNVNSTILRKVLTWAHYHKDD--- 67
            |.|||.|.|.||   ..|....|.:::.....:..:..:.:..|....|.:||.|.:.|:||
 Worm    34 LISSDGEKFQTD---GHCIRHSKVLMQASKSLETPDTPIQVEKVQGDTLNRVLEWCNNHRDDGKY 95

  Fly    68 ----------PQPTEDDESKEKRTDDIISWDADFLK-VDQGTLFELILAANYLDIKGLLELTCKT 121
                      ||                 ||..:|| :|...|.:||.|:|.|.::.|::..|||
 Worm    96 VSQCGPSLRLPQ-----------------WDFRWLKDLDNQELVDLINASNDLQMQQLMDYACKT 143

  Fly   122 VANMIKGKTPEEIRKTFNIKKDFSPAEEEQVRKENE 157
            ||||.|||.|.::|:.|.|..|    |||.....||
 Worm   144 VANMAKGKNPAQLRELFGILTD----EEEAELALNE 175

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpA	NP_001033818.1	BTB_POZ_SKP1	4..126	CDD:349631	38/133 (29%)
		Skp1	112..159	CDD:396171	21/46 (46%)
skr-16	NP_501128.2	Skp1	30..133	CDD:214704	31/118 (26%)
		Skp1	106..>165	CDD:279768	28/75 (37%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160160709
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5201
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1412723at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR11165
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	6	5.850