Protein Alignment SkpA and skr-16

DIOPT Version :10

• Sequence 1: NP_477390.1
• Gene: SkpA / 31016
• FlyBaseID: FBgn0025637
• Length: 162
• Species: Drosophila melanogaster
• Sequence 2: NP_501128.2
• Gene: skr-16 / 191765
• WormBaseID: WBGene00004822
• Length: 181
• Species: Caenorhabditis elegans
• Alignment Length: 166
• Identity: 52/166 - (31%)
• Similarity: 73/166 - (43%)
• Gaps: 38/166 - (22%)

  Fly     6 LQSSDEEIFDTDIQIAKCSGTIKTMLEDCGMEDDENAIVPLPNVNSTILRKVLTWAHYHKDD--- 67
            |.|||.|.|.||   ..|....|.:::.....:..:..:.:..|....|.:||.|.:.|:||
 Worm    34 LISSDGEKFQTD---GHCIRHSKVLMQASKSLETPDTPIQVEKVQGDTLNRVLEWCNNHRDDGKY 95

  Fly    68 ----------PQPTEDDESKEKRTDDIISWDADFLK-VDQGTLFELILAANYLDIKGLLELTCKT 121
                      ||                 ||..:|| :|...|.:||.|:|.|.::.|::..|||
 Worm    96 VSQCGPSLRLPQ-----------------WDFRWLKDLDNQELVDLINASNDLQMQQLMDYACKT 143

  Fly   122 VANMIKGKTPEEIRKTFNIKKDFSPAEEEQVRKENE 157
            ||||.|||.|.::|:.|.|..|    |||.....||
 Worm   144 VANMAKGKNPAQLRELFGILTD----EEEAELALNE 175

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpA	NP_477390.1	BTB_POZ_SKP1	4..126	CDD:349631	38/133 (29%)
		Skp1	112..159	CDD:460222	21/46 (46%)
skr-16	NP_501128.2	BTB_POZ_SKP1	31..148	CDD:349631	38/133 (29%)
		Skp1	134..>165	CDD:460222	15/30 (50%)