Protein Alignment SkpA and skr-6

DIOPT Version :9

• Sequence 1: NP_001033818.1
• Gene: SkpA / 31016
• FlyBaseID: FBgn0025637
• Length: 162
• Species: Drosophila melanogaster
• Sequence 2: NP_507574.2
• Gene: skr-6 / 191763
• WormBaseID: WBGene00004812
• Length: 106
• Species: Caenorhabditis elegans
• Alignment Length: 115
• Identity: 45/115 - (39%)
• Similarity: 70/115 - (60%)
• Gaps: 13/115 - (11%)

  Fly    44 VPLPNVNSTILRKVLTWAHYHKDDPQPTEDDESKEKRTDDIISWDADFLKVDQGTLFELILAANY 108
            :||..|::.|..|::.:.. |:..|:|..:.|..|        ||::|||:||.|||:|:|||||
 Worm     4 IPLTKVDAKIFEKIIEYCE-HQGTPRPLLNGEIGE--------WDSEFLKLDQNTLFDLVLAANY 59

  Fly   109 LDIKGLLELTCKTVANMIKGKTPEEIRKTFNIKKDFSPAEEEQVRKENEW 158
            |:|:.|.::|.:.:|||:|..||.:||..|.:....|.||:   |.:| |
 Worm    60 LNIENLFDVTTQFIANMMKNNTPSQIRARFGVSNKHSSAED---RSDN-W 105

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpA	NP_001033818.1	BTB_POZ_SKP1	4..126	CDD:349631	32/81 (40%)
		Skp1	112..159	CDD:396171	17/47 (36%)
skr-6	NP_507574.2	Skp1	<2..62	CDD:214704	27/66 (41%)
		Skp1	37..>93	CDD:279768	30/63 (48%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160160701
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5201
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1412723at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR11165
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	7	6.810