Protein Alignment SkpA and skr-4

DIOPT Version :9

• Sequence 1: NP_001033818.1
• Gene: SkpA / 31016
• FlyBaseID: FBgn0025637
• Length: 162
• Species: Drosophila melanogaster
• Sequence 2: NP_507857.1
• Gene: skr-4 / 191762
• WormBaseID: WBGene00004810
• Length: 159
• Species: Caenorhabditis elegans
• Alignment Length: 159
• Identity: 78/159 - (49%)
• Similarity: 104/159 - (65%)
• Gaps: 10/159 - (6%)

  Fly     4 IKLQSSDEEIFDTDIQIAKCSGTIKTMLEDCGMEDDENAIVPLPNVNSTILRKVLTWAHYHKDD- 67
            |||.|||::.|....::...|.||.      |...::.  :|||.|.|.||.|::||..:|.||
 Worm    10 IKLISSDDKTFTVSRKVISQSKTIS------GFTSEDT--IPLPKVTSAILEKIITWCEHHADDE 66

  Fly    68 PQPTEDDESKEKRTDDIISWDADFLKVDQGTLFELILAANYLDIKGLLELTCKTVANMIKGKTPE 132
            |:..|..|...|:|.:|..|||:|:|||||||||:|||||||||:||||:|.:.||||:|||||.
 Worm    67 PKKVEKIEKGNKKTVEISEWDAEFMKVDQGTLFEIILAANYLDIRGLLEVTTQNVANMMKGKTPS 131

  Fly   133 EIRKTFNIKKDFSPAEEEQVRKENEWCEE 161
            ::|..|.| .:||..|.|.::|.|.|||:
 Worm   132 QVRTLFKI-DNFSEEELEAMKKGNAWCED 159

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpA	NP_001033818.1	BTB_POZ_SKP1	4..126	CDD:349631	60/122 (49%)
		Skp1	112..159	CDD:396171	23/46 (50%)
skr-4	NP_507857.1	Skp1	7..110	CDD:214704	50/107 (47%)
		SKP1	10..159	CDD:227528	77/157 (49%)
		Skp1	84..157	CDD:279768	45/73 (62%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160160708
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5201
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG54148
OrthoDB	1	1.010	-	-		D1412723at2759
OrthoFinder	1	1.000	-	-		FOG0000367
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR11165
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	8	7.820