Protein Alignment SkpA and skr-19

DIOPT Version :10

• Sequence 1: NP_477390.1
• Gene: SkpA / 31016
• FlyBaseID: FBgn0025637
• Length: 162
• Species: Drosophila melanogaster
• Sequence 2: NP_510193.4
• Gene: skr-19 / 181446
• WormBaseID: WBGene00004825
• Length: 155
• Species: Caenorhabditis elegans
• Alignment Length: 154
• Identity: 50/154 - (32%)
• Similarity: 75/154 - (48%)
• Gaps: 26/154 - (16%)

  Fly     5 KLQSSDEEIFDTDIQIAKCSGTIKTMLEDCGMEDDENAIVPLP-------NVNSTILRKVLTWAH 62
            ||:|:|.:.|..|.:.....|.|:.:..:.|::     ::|..       .:.:|::|||:.|..
 Worm    11 KLRSTDGQRFLADRRTIGMIGRIEDLFRNAGLD-----LIPADQLQPIQLEIPATVMRKVIEWCD 70

  Fly    63 YHKDDPQPTEDDESKEKRTDDIISWDADFLKVDQGTLFELILAANYLDIKGLLELTCKTVANMIK 127
            :||.||   ..||| |..|:||..|||.||.|....||::|.||....:.||..:.|:.|
 Worm    71 HHKHDP---PYDES-EPETNDIPDWDASFLMVRHNMLFDIIRAARDFTVPGLFAMCCRVV----- 126

  Fly   128 GKTPEEIRKTFNIKKDFSPAEEEQ 151
            |:.|.||     |....:..||||
 Worm   127 GQNPREI-----IDGLVNDEEEEQ 145

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpA	NP_477390.1	BTB_POZ_SKP1	4..126	CDD:349631	41/127 (32%)
		Skp1	112..159	CDD:460222	13/40 (33%)
skr-19	NP_510193.4	BTB_POZ_SKP1	9..129	CDD:349631	42/131 (32%)