Protein Alignment SkpA and skr-7

DIOPT Version :9

• Sequence 1: NP_001033818.1
• Gene: SkpA / 31016
• FlyBaseID: FBgn0025637
• Length: 162
• Species: Drosophila melanogaster
• Sequence 2: NP_504221.1
• Gene: skr-7 / 178840
• WormBaseID: WBGene00004813
• Length: 194
• Species: Caenorhabditis elegans
• Alignment Length: 160
• Identity: 58/160 - (36%)
• Similarity: 92/160 - (57%)
• Gaps: 5/160 - (3%)

  Fly     5 KLQSSDEEIFDTDIQIAKCSGTIKTMLEDCGMEDDENAIVPLP--NVNSTILRKVLTWAHYHKDD 67
            |::|||.::::...:..|.|.|:..::..| :.:|..::.|:|  ||...|::.|:.|...||.:
 Worm    24 KVESSDGQVYEISDEAVKQSNTLSNLISTC-VANDVASMDPIPITNVTGNIMKMVIEWCEKHKGE 87

  Fly    68 PQPTEDDESKEKRTDDIISWDADFLKVDQGTLFELILAANYLDIKGLLELTCKTVANMIKGKTPE 132
            ..|.|||...:..|  :..||.:|||:|...||:||:|:|:||:.||:...||.||||..||:|:
 Worm    88 TLPVEDDSVPKNIT--VPEWDTNFLKIDNDVLFDLIVASNFLDVPGLMSYACKMVANMAIGKSPD 150

  Fly   133 EIRKTFNIKKDFSPAEEEQVRKENEWCEEK 162
            |:|..|.|..|......|:..||....|:|
 Worm   151 EMRVLFAIPTDEEDEAAEKAAKEKAEAEKK 180

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpA	NP_001033818.1	BTB_POZ_SKP1	4..126	CDD:349631	44/122 (36%)
		Skp1	112..159	CDD:396171	19/46 (41%)
skr-7	NP_504221.1	Skp1	20..129	CDD:214704	36/107 (34%)
		Skp1	103..>160	CDD:279768	29/56 (52%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160160710
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5201
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG54148
OrthoDB	1	1.010	-	-		D1412723at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR11165
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	7	6.860