Protein Alignment SkpA and skr-14

DIOPT Version :9

• Sequence 1: NP_001033818.1
• Gene: SkpA / 31016
• FlyBaseID: FBgn0025637
• Length: 162
• Species: Drosophila melanogaster
• Sequence 2: NP_504220.4
• Gene: skr-14 / 178839
• WormBaseID: WBGene00004820
• Length: 168
• Species: Caenorhabditis elegans
• Alignment Length: 148
• Identity: 57/148 - (38%)
• Similarity: 82/148 - (55%)
• Gaps: 5/148 - (3%)

  Fly     5 KLQSSDEEIFDTDIQIAKCSGTIKTMLEDCG--MEDDENA-IVPLPNVNSTILRKVLTWAHYHKD 66
            |:.|:|..:.....:..:.|.|:..::|:.|  :|:.|.. .:|:.|||...:.||..|...|..
 Worm    16 KIISNDGVVTKMSEKAVQQSKTLSNLIENLGYTIENIETRDPIPVTNVNGKTMEKVAEWCEKHNA 80

  Fly    67 DPQPTEDDESKEKRTDDIISWDADFLKVDQGTLFELILAANYLDIKGLLELTCKTVANMIKGKTP 131
            |..|  :|.....:|..|..||..|||::...||:||||:|:||||||:...||||:||.||||.
 Worm    81 DAIP--EDNMNVLKTLTIPEWDQKFLKIEDEALFDLILASNFLDIKGLMYYGCKTVSNMAKGKTT 143

  Fly   132 EEIRKTFNIKKDFSPAEE 149
            .|:|:.|.|..|...|.|
 Worm   144 AELREIFGINTDEQDAAE 161

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpA	NP_001033818.1	BTB_POZ_SKP1	4..126	CDD:349631	45/123 (37%)
		Skp1	112..159	CDD:396171	20/38 (53%)
skr-14	NP_504220.4	Skp1	12..123	CDD:214704	35/108 (32%)
		Skp1	97..161	CDD:279768	34/63 (54%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160160700
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5201
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG54148
OrthoDB	1	1.010	-	-		D1412723at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR11165
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	7	6.860