Protein Alignment SkpA and skr-14

DIOPT Version :10

• Sequence 1: NP_477390.1
• Gene: SkpA / 31016
• FlyBaseID: FBgn0025637
• Length: 162
• Species: Drosophila melanogaster
• Sequence 2: NP_504220.4
• Gene: skr-14 / 178839
• WormBaseID: WBGene00004820
• Length: 168
• Species: Caenorhabditis elegans
• Alignment Length: 148
• Identity: 57/148 - (38%)
• Similarity: 82/148 - (55%)
• Gaps: 5/148 - (3%)

  Fly     5 KLQSSDEEIFDTDIQIAKCSGTIKTMLEDCG--MEDDENA-IVPLPNVNSTILRKVLTWAHYHKD 66
            |:.|:|..:.....:..:.|.|:..::|:.|  :|:.|.. .:|:.|||...:.||..|...|..
 Worm    16 KIISNDGVVTKMSEKAVQQSKTLSNLIENLGYTIENIETRDPIPVTNVNGKTMEKVAEWCEKHNA 80

  Fly    67 DPQPTEDDESKEKRTDDIISWDADFLKVDQGTLFELILAANYLDIKGLLELTCKTVANMIKGKTP 131
            |..|  :|.....:|..|..||..|||::...||:||||:|:||||||:...||||:||.||||.
 Worm    81 DAIP--EDNMNVLKTLTIPEWDQKFLKIEDEALFDLILASNFLDIKGLMYYGCKTVSNMAKGKTT 143

  Fly   132 EEIRKTFNIKKDFSPAEE 149
            .|:|:.|.|..|...|.|
 Worm   144 AELREIFGINTDEQDAAE 161

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpA	NP_477390.1	BTB_POZ_SKP1	4..126	CDD:349631	45/123 (37%)
		Skp1	112..159	CDD:460222	20/38 (53%)
skr-14	NP_504220.4	BTB_POZ_SKP1	14..138	CDD:349631	45/123 (37%)
		Skp1	124..>161	CDD:460222	19/36 (53%)