Protein Alignment SkpA and skr-12

DIOPT Version :10

• Sequence 1: NP_477390.1
• Gene: SkpA / 31016
• FlyBaseID: FBgn0025637
• Length: 162
• Species: Drosophila melanogaster
• Sequence 2: NP_001367151.1
• Gene: skr-12 / 178496
• WormBaseID: WBGene00004818
• Length: 172
• Species: Caenorhabditis elegans
• Alignment Length: 153
• Identity: 60/153 - (39%)
• Similarity: 86/153 - (56%)
• Gaps: 5/153 - (3%)

  Fly     5 KLQSSDEEIFDTDIQIAKCSGTIKTMLEDCG--MEDDENA-IVPLPNVNSTILRKVLTWAHYHKD 66
            |:.|||..:.....:..:.|.|:..::|:.|  :|:.|.. .:|:.|||...:.||..|...||.
 Worm    16 KIISSDGVVSKMSEKAVQQSKTLSNLIENLGYTIENIETRDPIPVTNVNGKTMAKVAEWCEKHKA 80

  Fly    67 DPQPTEDDESKEKRTDDIISWDADFLKVDQGTLFELILAANYLDIKGLLELTCKTVANMIKGKTP 131
            |..|  :|.....:|..|..||..|||::...||:||||:|:||||||:...||||:||.||||.
 Worm    81 DAIP--EDNMNVLKTLTIPEWDQKFLKIEDEALFDLILASNFLDIKGLMYFGCKTVSNMAKGKTT 143

  Fly   132 EEIRKTFNIKKDFSPAEEEQVRK 154
            .|:|:.|.|..|...|.||..::
 Worm   144 AELREIFGINTDEQDAAEETAQR 166

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpA	NP_477390.1	BTB_POZ_SKP1	4..126	CDD:349631	47/123 (38%)
		Skp1	112..159	CDD:460222	21/43 (49%)
skr-12	NP_001367151.1	BTB_POZ_SKP1	14..138	CDD:349631	47/123 (38%)
		Skp1	124..169	CDD:460222	21/43 (49%)