Protein Alignment SkpA and skr-8

DIOPT Version :9

• Sequence 1: NP_001033818.1
• Gene: SkpA / 31016
• FlyBaseID: FBgn0025637
• Length: 162
• Species: Drosophila melanogaster
• Sequence 2: NP_503044.1
• Gene: skr-8 / 178495
• WormBaseID: WBGene00004814
• Length: 194
• Species: Caenorhabditis elegans
• Alignment Length: 159
• Identity: 58/159 - (36%)
• Similarity: 88/159 - (55%)
• Gaps: 3/159 - (1%)

  Fly     5 KLQSSDEEIFDTDIQIAKCSGTIKTMLEDCGMEDDENA-IVPLPNVNSTILRKVLTWAHYHKDDP 68
            |::|:|.::|:...:..|.|..:..::..|..||..:. .:|:.||...||:.|:.|...||.:.
 Worm    24 KVESNDGKVFEISDEAVKQSNILSNLISTCAPEDVASMDPIPITNVTGNILKMVIEWCEKHKGEA 88

  Fly    69 QPTEDDESKEKRTDDIISWDADFLKVDQGTLFELILAANYLDIKGLLELTCKTVANMIKGKTPEE 133
            .|.|||  ...:..::..||.:|||:|...||:||:|.||||:.||:...||.||||..||:|:|
 Worm    89 LPVEDD--SVPKNINVPEWDTNFLKIDNEVLFDLIVACNYLDVPGLMNYGCKMVANMAIGKSPDE 151

  Fly   134 IRKTFNIKKDFSPAEEEQVRKENEWCEEK 162
            :|..|.|..|......|:..||....|:|
 Worm   152 LRIIFAIPTDEEDEAAERAAKEKAEAEKK 180

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpA	NP_001033818.1	BTB_POZ_SKP1	4..126	CDD:349631	44/121 (36%)
		Skp1	112..159	CDD:396171	19/46 (41%)
skr-8	NP_503044.1	Skp1	20..129	CDD:214704	36/106 (34%)
		Skp1	103..>161	CDD:279768	30/57 (53%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160160696
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5201
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG54148
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR11165
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	6	5.850